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T1XKG4 (T1XKG4_VARPD) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:VAPA_2c02370 EMBL AGU52799.1
OrganismVariovorax paradoxus B4 [Complete proteome] EMBL AGU52799.1
Taxonomic identifier1246301 [NCBI]
Taxonomic lineageBacteriaProteobacteriaBetaproteobacteriaBurkholderialesComamonadaceaeVariovorax

Protein attributes

Sequence length592 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

Sequence LengthMass (Da)Tools
T1XKG4 [UniParc].

Last modified November 13, 2013. Version 1.
Checksum: 90F718C92CB3EA54

FASTA59263,836
        10         20         30         40         50         60 
MRTRDEKKND EASHAIHDAD TDPPQALTGT TRRSLLRSAV LFAMFSGSGI GLTACGGGGG 

        70         80         90        100        110        120 
GGGGGIGGGV GGGRPPDGSD SVFKHGIASG DPLSDRVILW ARVTVSAPGT LNVEWEVASD 

       130        140        150        160        170        180 
ERFGIIVARG TASTGPERDY TVKVDAVGLQ PASTYFYRFS MGNENSPIGR TRTLPVGGVS 

       190        200        210        220        230        240 
QARLAVVSCS NFPSGYFNVY ADIAKRTDID VVLHLGDYIY EYGRVGYASQ LAIAIDRESN 

       250        260        270        280        290        300 
PDHEILTLAD YRLRHAQYRT DGDLRALHAR LPVIAVWDDH DLADDAWSGG AENHDEATEG 

       310        320        330        340        350        360 
SFAARRAAAM QAYHEWLPTR LPDPANPLRI YRTFDFGTLA SMHMLDTRLI GRDRQVTLQQ 

       370        380        390        400        410        420 
YLAGEASAPT RQLMGQPQVD WLAERMAASP CTWQVLGQQV LMMRMAIPLS IATDFTLETL 

       430        440        450        460        470        480 
GAYLAAQALP ESARSDSQRA LIAQQKVPYN MDAWDGYPAA RDAVLAMARN QGKNLISLAG 

       490        500        510        520        530        540 
DTHNAWAGNL TDASGQRVGV EFGTSSVSSP GFERMLPLIA SDLLSDGFRR MVDDLRYAET 

       550        560        570        580        590 
SKRGYAVLTL TPAEARCDYV EISTVLSRDY SVRTAATLRA LPGVGNLQVL AA 

« Hide

References

[1]"Genome sequence of Variovorax paradoxus B4."
Schuldes J., Brandt U., Hiessl S., Wuebbeler J.H., Thuermer A., Steinbuechel A., Daniel R.
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: B4 EMBL AGU52799.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003912 Genomic DNA. Translation: AGU52799.1.
RefSeqYP_008493259.1. NC_022234.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGU52799; AGU52799; VAPA_2c02370.
GeneID16747713.
KEGGvpd:VAPA_2c02370.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01113.

Family and domain databases

Gene3D3.60.21.10. 1 hit.
InterProIPR018946. Alk_phosphatase_PhoD-like.
IPR029052. Metallo-depent_PP-like.
[Graphical view]
PfamPF09423. PhoD. 1 hit.
[Graphical view]
SUPFAMSSF56300. SSF56300. 2 hits.
ProtoNetSearch...

Entry information

Entry nameT1XKG4_VARPD
AccessionPrimary (citable) accession number: T1XKG4
Entry history
Integrated into UniProtKB/TrEMBL: November 13, 2013
Last sequence update: November 13, 2013
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)