Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

S5YWG2 (S5YWG2_9BACI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:M493_03685 EMBL AGT31044.1
OrganismGeobacillus sp. JF8 [Complete proteome] EMBL AGT31044.1
Taxonomic identifier1345697 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus

Protein attributes

Sequence length511 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLyase EMBL AGT31044.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncation binding

Inferred from electronic annotation. Source: InterPro

lyase activity

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
S5YWG2 [UniParc].

Last modified October 16, 2013. Version 1.
Checksum: 2F4B9F6768594931

FASTA51159,864
        10         20         30         40         50         60 
MGNRLCALLI LPFLLFYAWP VQAAEKEERT WQDEAIYFIM VDRFNNMDPT NDEDVNVNDP 

        70         80         90        100        110        120 
KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFENMPGGYH GYWIKDFYRV DPHFGTLDDL 

       130        140        150        160        170        180 
KTLVKEAHKR DMKVILDFVA NHVGYNHPWL HDPAKKDWFH PKKEIFDWSN QRQLENGWVY 

       190        200        210        220        230        240 
GLPDLAQENP EVKKYLIDAA KWWIKEADID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF 

       250        260        270        280        290        300 
LLGEVWSDDP RDLAEYGKYG IDGFVDYPLY GAVKQSLAKR DASLRPLYDV WEYNKTFYDR 

       310        320        330        340        350        360 
PYLLGTFLDN HDNVRFTKLA IDNRNNPVSR IKVAMTYLFT APGIPIMYYG TEIAMNGGED 

       370        380        390        400        410        420 
PDNRRLMDFR ADPEIIDYLK KIGPLRQQLP SLRRGDFTLL YEKDGMAVWK RQYEDETTVI 

       430        440        450        460        470        480 
AINNTGETQH VHLTNDQLPQ NKELRGFLLD DLVRGDDDGY DIILDRETAE VYKLREKTGL 

       490        500        510 
NIPFIAAIVI VYALFLLFLY MVKKRAKRMP E 

« Hide

References

[1]"Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937)."
Shintani M., Ohtsubo Y., Fukuda K., Hosoyama A., Ohji S., Yamazoe A., Fujita N., Nagata Y., Tsuda M., Hatta T., Kimbara K.
Genome Announc. 2:e01213-13(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: JF8 EMBL AGT31044.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006254 Genomic DNA. Translation: AGT31044.1.
RefSeqYP_008416589.1. NC_022080.4.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGT31044; AGT31044; M493_03685.
GeneID16556804.
KEGGgjf:M493_03685.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameS5YWG2_9BACI
AccessionPrimary (citable) accession number: S5YWG2
Entry history
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: June 11, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)