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S5YWG2

- S5YWG2_9BACI

UniProt

S5YWG2 - S5YWG2_9BACI

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Protein
Submitted name:

Alpha-amlyase

Gene
M493_03685
Organism
Geobacillus sp. JF8
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. lyase activity Source: UniProtKB-KW

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseImported

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amlyaseImported
Gene namesi
ORF Names:M493_03685Imported
OrganismiGeobacillus sp. JF8Imported
Taxonomic identifieri1345697 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeGeobacillus
ProteomesiUP000015500: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5YWG2-1 [UniParc]FASTAAdd to Basket

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MGNRLCALLI LPFLLFYAWP VQAAEKEERT WQDEAIYFIM VDRFNNMDPT    50
NDEDVNVNDP KGYFGGDLKG VTAKLDYIKE MGFTAIWLTP IFENMPGGYH 100
GYWIKDFYRV DPHFGTLDDL KTLVKEAHKR DMKVILDFVA NHVGYNHPWL 150
HDPAKKDWFH PKKEIFDWSN QRQLENGWVY GLPDLAQENP EVKKYLIDAA 200
KWWIKEADID GYRLDTVRHV PKSFWQEFAK EVKSVKKDFF LLGEVWSDDP 250
RDLAEYGKYG IDGFVDYPLY GAVKQSLAKR DASLRPLYDV WEYNKTFYDR 300
PYLLGTFLDN HDNVRFTKLA IDNRNNPVSR IKVAMTYLFT APGIPIMYYG 350
TEIAMNGGED PDNRRLMDFR ADPEIIDYLK KIGPLRQQLP SLRRGDFTLL 400
YEKDGMAVWK RQYEDETTVI AINNTGETQH VHLTNDQLPQ NKELRGFLLD 450
DLVRGDDDGY DIILDRETAE VYKLREKTGL NIPFIAAIVI VYALFLLFLY 500
MVKKRAKRMP E 511
Length:511
Mass (Da):59,864
Last modified:October 16, 2013 - v1
Checksum:i2F4B9F6768594931
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006254 Genomic DNA. Translation: AGT31044.1.
RefSeqiWP_020958854.1. NC_022080.4.
YP_008416589.1. NC_022080.4.

Genome annotation databases

EnsemblBacteriaiAGT31044; AGT31044; M493_03685.
GeneIDi16556804.
KEGGigjf:M493_03685.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006254 Genomic DNA. Translation: AGT31044.1 .
RefSeqi WP_020958854.1. NC_022080.4.
YP_008416589.1. NC_022080.4.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGT31044 ; AGT31044 ; M493_03685 .
GeneIDi 16556804.
KEGGi gjf:M493_03685.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Thermophilic Polychlorinated Biphenyl Degrader Geobacillus sp. Strain JF8 (NBRC 109937)."
    Shintani M., Ohtsubo Y., Fukuda K., Hosoyama A., Ohji S., Yamazoe A., Fujita N., Nagata Y., Tsuda M., Hatta T., Kimbara K.
    Genome Announc. 2:e01213-13(2014) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JF8Imported.

Entry informationi

Entry nameiS5YWG2_9BACI
AccessioniPrimary (citable) accession number: S5YWG2
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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