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S5VAV5 (S5VAV5_STRCU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:B446_04145 EMBL AGS67657.1
OrganismStreptomyces collinus Tu 365 [Complete proteome] EMBL AGS67657.1
Taxonomic identifier1214242 [NCBI]
Taxonomic lineageBacteriaActinobacteriaActinobacteridaeActinomycetalesStreptomycineaeStreptomycetaceaeStreptomyces

Protein attributes

Sequence length572 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
S5VAV5 [UniParc].

Last modified October 16, 2013. Version 1.
Checksum: 17EAC43F629DEC09

FASTA57265,972
        10         20         30         40         50         60 
MTVNDPVPDT FEDTPVKDRD PEWFKRAVFY EVLVRSFQDS DGDGIGDLKG LTAKLDYLQW 

        70         80         90        100        110        120 
LGVDCLWLPP FFKSPLRDGG YDVSDYTAVL PEFGDLADFV EFADAAHQRG MRVIIDFVMN 

       130        140        150        160        170        180 
HTSDQHPWFQ ESRTNPDGPY GDYYMWADDD KQYEDARIIF VDTEVSNWTF DPVRGQYYFH 

       190        200        210        220        230        240 
RFFSHQPDLN YENPAVQEEI LAALKFWLDL GIDGFRLDAV PYLYAEEGTN CENLPATHQF 

       250        260        270        280        290        300 
LKRVRKEIDA QYPDTVLLAE ANQWPEDVVD YFGDYSSGGD ECHMAFHFPV MPRIFMAVRR 

       310        320        330        340        350        360 
ESRYPVSEIL AKTPAIPSNC QWGIFLRNHD ELTLEMVTDE ERDYMWAEYA KDPRMRANIG 

       370        380        390        400        410        420 
IRRRLAPLLD NDRNQIELFT ALLLSLPGSP ILYYGDEIGM GDNIWLGDRD AVRTPMQWTP 

       430        440        450        460        470        480 
DRNAGFSSSD PGRLFLPTIM DPVYGYQVTN VEASMSSPSS LLHWTRRMIE IRKQNPAFGL 

       490        500        510        520        530        540 
GSFTELQSSN PAVLAFLREY GDDLVLCVHN FSRFAQPTEL DLRTYDGRHP VELIGGVRFP 

       550        560        570 
AIGELPYLLT LAGHGFYWFR LTRVASRIGR RR 

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References

[1]"The complete genome sequence of Streptomyces collinus Tu 365."
Ruckert C., Szczepanowski R., Goesmann A., Pross E.K., Musiol E.M., Blin K., Wohlleben W., Puhler A., Weber T., Kalinowski J.
Submitted (OCT-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Tu 365 EMBL AGS67657.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006259 Genomic DNA. Translation: AGS67657.1.
RefSeqYP_008384468.1. NC_021985.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGS67657; AGS67657; B446_04145.
GeneID16495136.
KEGGsci:B446_04145.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameS5VAV5_STRCU
AccessionPrimary (citable) accession number: S5VAV5
Entry history
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)