Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Alpha-amylase

Gene

treS

Organism
Rhizobium etli bv. mimosae str. Mim1
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase, IsomeraseImported

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
Name:treSImported
ORF Names:REMIM1_CH02270Imported
OrganismiRhizobium etli bv. mimosae str. Mim1Imported
Taxonomic identifieri1328306 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesRhizobiaceaeRhizobium/Agrobacterium groupRhizobium
Proteomesi
  • UP000015261 Componenti: Chromosome

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini14 – 418AamyInterPro annotationAdd BLAST405

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK05343.
OrthoDBiPOG091H07NZ.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5SIV0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MINDLWYKNA VIYCLSVESF MDANGDGVGD FQGLMRRLDY LSGLGVTAIW
60 70 80 90 100
LMPFQTSPGR DDGYDVSDYY NVDPRYGSLG DFVEFTHGAK QRGIRVLIDL
110 120 130 140 150
VINHTSKDHP WFEDARSDPH SRYREWYVWS DKKPANADQG MVFPGVQKTT
160 170 180 190 200
WTYDEKAKGY YFHRFYDHQP DLNTSNPEVQ AEILKIMGFW IQLGVSGFRM
210 220 230 240 250
DAAPFIIATK GAEVTKPVEQ FDMLRKFREF LQWRLGDSIV LAEANILPKD
260 270 280 290 300
NFEYFGEDGD RMQMMFNFQV NQTLFYALAT ADTRPLKKAM DATKPRPATA
310 320 330 340 350
QWGLFLRNHD ELDLGRLTDK QRDAVFAAFG PEKEMQLYDR GIRRRLAPML
360 370 380 390 400
GGDRRRIELA YSLLFSLPGT PVIRYGDEIG MGDDLCLPER NCARTPMQWS
410 420 430 440 450
TEPEGGFTKS AKPVSPVIKD GPYGFEHINV AVQRRDPNSL LNWTERMIRM
460 470 480 490 500
RKEAPEIGWG DFSAVDTGDD GVLALRYDWR GNSVLILHNL HPHPTEVTFD
510 520 530 540 550
PDVGELGRLL IDIADGASSE ADEKGRHTVM LDAYGYRWYR VGGLDYLLRR

KDI
Length:553
Mass (Da):63,365
Last modified:October 16, 2013 - v1
Checksum:i5B609A343983AB08
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005950 Genomic DNA. Translation: AGS22052.1.
RefSeqiWP_020921383.1. NC_021905.1.

Genome annotation databases

EnsemblBacteriaiAGS22052; AGS22052; REMIM1_CH02270.
KEGGirel:REMIM1_CH02270.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005950 Genomic DNA. Translation: AGS22052.1.
RefSeqiWP_020921383.1. NC_021905.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGS22052; AGS22052; REMIM1_CH02270.
KEGGirel:REMIM1_CH02270.

Phylogenomic databases

KOiK05343.
OrthoDBiPOG091H07NZ.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013780. Glyco_hydro_b.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 2 hits.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiS5SIV0_RHIET
AccessioniPrimary (citable) accession number: S5SIV0
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: November 30, 2016
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.