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S5PPR4

- S5PPR4_PASHA

UniProt

S5PPR4 - S5PPR4_PASHA

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Protein
Submitted name: Alpha-amylase
Gene
malS, N220_10795
Organism
Mannheimia haemolytica USMARC_2286
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:N220_10795Imported
OrganismiMannheimia haemolytica USMARC_2286Imported
Taxonomic identifieri1366053 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeMannheimia
ProteomesiUP000015084: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliS5PPR4.

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

S5PPR4-1 [UniParc]FASTAAdd to Basket

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MKNALPYLCL FYTSSLFAQS WQHSHFSDFN DDLEKHFFQS QVQLEKGSYP    50
LRFKFGEQCY QPQQAIKLNQ SVALVPCINE APQLRLFRQG NYLAQIDLRS 100
GTPTPTISVE QQLQHNEAMF QSCPNWDKKP IEIDVSSTFA EGESVSDFYS 150
GNTAIVKNGK VTLMPNENAS GLILLEKSNT ENTATFDWKN ATVYFVLTDR 200
FYNGDPTNDH SYHRQKDGMQ EIGTFHGGDL KGLTEKLDYL QQLGVNVLWI 250
SSPLEQMHGW VGGGDKGDFP HYGYHGYYHL DWTKLDANMG TEDDLSRFVQ 300
QAHQRGIRVL FDVVMNHTGY ATLADMQEFN FGGFYLTPDE ISRTLGEKWT 350
HWKPKSGQNW HSFNDFIRFN DNQAWQNWWG KEWVRADIAD YDSPKFDDLK 400
MSLAALPDLK TESEQAVKLP EFFANKNTNA KTLPNAKVRD YLIGWLSDWV 450
RKYGIDGFRV DTAKHVEKST WLVLKQSAQQ ALNEWQKANP NAGFNDRFWM 500
TGEAWGHGVF KSDYYQNGFD AMINFDFQDQ AKQGLNCFAH IEPIYAEMNR 550
KLSDFNVLSY LSSHDTRLFF HSDSEQNIEK HKTAANLLLL SPGAVQIYYG 600
DESGRTFGAT GSDLIQGTRS DMNWQELQQD PQKQALHQHW QKLTQFRQRH 650
PAIGAGVHQL IKNDSYFAFK RVLNEDKVMV VWAGN 685
Length:685
Mass (Da):78,841
Last modified:October 16, 2013 - v1
Checksum:iA9AF20BBD5446D11
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006619 Genomic DNA. Translation: AGR75765.1.
RefSeqiWP_006248006.1. NC_021883.1.
YP_008339586.1. NC_021883.1.

Genome annotation databases

EnsemblBacteriaiAGR75765; AGR75765; N220_10795.
GeneIDi16910810.
KEGGimhal:N220_10795.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006619 Genomic DNA. Translation: AGR75765.1 .
RefSeqi WP_006248006.1. NC_021883.1.
YP_008339586.1. NC_021883.1.

3D structure databases

ProteinModelPortali S5PPR4.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGR75765 ; AGR75765 ; N220_10795 .
GeneIDi 16910810.
KEGGi mhal:N220_10795.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Reducing assembly complexity of microbial genomes with single-molecule sequencing."
    Koren S., Harhay G.P., Smith T.P.L., Bono J.L., Harhay D.M., McVey S., Radune D., Bergman N.H., Phillippy A.M.
    Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: USMARC_2286Imported.

Entry informationi

Entry nameiS5PPR4_PASHA
AccessioniPrimary (citable) accession number: S5PPR4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: September 3, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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