SubmitCancel

Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

S5JRG4

- S5JRG4_VIBPH

UniProt

S5JRG4 - S5JRG4_VIBPH

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name: Alpha-amylase
Gene
malS, M636_21750
Organism
Vibrio parahaemolyticus O1:K33 str. CDC_K4557
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:M636_21750Imported
OrganismiVibrio parahaemolyticus O1:K33 str. CDC_K4557Imported
Taxonomic identifieri1338032 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000014945: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5JRG4-1 [UniParc]FASTAAdd to Basket

« Hide

MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEPNSD GLLVAEQKLE    50
KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK 100
ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVVQTFTDG 150
TVVRDALTGQ EATVANGSVT MQPGPISQGL LLLEEVDQQA EKPFSWDNAT 200
VYFVMTDRFY NGNPDNDNSY GRNKDGKYEI GTFHGGDLAG LTKKLDYIES 250
LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTE 300
DELRTFIDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK 350
EVLGEKWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD 400
APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKDTNAQD ELKTPREHLI 450
TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKARTTQALA EWKQNHPDKA 500
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL 550
DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM 600
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ 650
KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE 694
Length:694
Mass (Da):78,863
Last modified:October 16, 2013 - v1
Checksum:i49EFD3E1F1F97E16
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006008 Genomic DNA. Translation: AGQ99566.1.
RefSeqiWP_020904414.1. NC_021848.1.
YP_008317642.1. NC_021848.1.

Genome annotation databases

EnsemblBacteriaiAGQ99566; AGQ99566; M636_21750.
GeneIDi16893833.
KEGGivpk:M636_21750.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006008 Genomic DNA. Translation: AGQ99566.1 .
RefSeqi WP_020904414.1. NC_021848.1.
YP_008317642.1. NC_021848.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGQ99566 ; AGQ99566 ; M636_21750 .
GeneIDi 16893833.
KEGGi vpk:M636_21750.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "100K Food-borne pathogen sequencing project."
    100K Food-borne pathogen sequencing consortium
    Jones J., Zhao S., Xie Y., Thao K., Dao N., Clark T.A., Boitano M., Korlach J., Weimer B.
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CDC_K4557Imported.

Entry informationi

Entry nameiS5JRG4_VIBPH
AccessioniPrimary (citable) accession number: S5JRG4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: September 3, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi