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S5JRG4

- S5JRG4_VIBPH

UniProt

S5JRG4 - S5JRG4_VIBPH

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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Vibrio parahaemolyticus O1:K33 str. CDC_K4557
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:M636_21750Imported
OrganismiVibrio parahaemolyticus O1:K33 str. CDC_K4557Imported
Taxonomic identifieri1338032 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000014945: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5JRG4 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEPNSD GLLVAEQKLE
60 70 80 90 100
KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK
110 120 130 140 150
ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVVQTFTDG
160 170 180 190 200
TVVRDALTGQ EATVANGSVT MQPGPISQGL LLLEEVDQQA EKPFSWDNAT
210 220 230 240 250
VYFVMTDRFY NGNPDNDNSY GRNKDGKYEI GTFHGGDLAG LTKKLDYIES
260 270 280 290 300
LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTE
310 320 330 340 350
DELRTFIDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK
360 370 380 390 400
EVLGEKWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD
410 420 430 440 450
APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKDTNAQD ELKTPREHLI
460 470 480 490 500
TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKARTTQALA EWKQNHPDKA
510 520 530 540 550
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL
560 570 580 590 600
DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM
610 620 630 640 650
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ
660 670 680 690
KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE
Length:694
Mass (Da):78,863
Last modified:October 16, 2013 - v1
Checksum:i49EFD3E1F1F97E16
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006008 Genomic DNA. Translation: AGQ99566.1.
RefSeqiYP_008317642.1. NC_021848.1.

Genome annotation databases

EnsemblBacteriaiAGQ99566; AGQ99566; M636_21750.
GeneIDi16893833.
KEGGivpk:M636_21750.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP006008 Genomic DNA. Translation: AGQ99566.1 .
RefSeqi YP_008317642.1. NC_021848.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGQ99566 ; AGQ99566 ; M636_21750 .
GeneIDi 16893833.
KEGGi vpk:M636_21750.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "100K Food-borne pathogen sequencing project."
    100K Food-borne pathogen sequencing consortium
    Jones J., Zhao S., Xie Y., Thao K., Dao N., Clark T.A., Boitano M., Korlach J., Weimer B.
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: CDC_K4557Imported.

Entry informationi

Entry nameiS5JRG4_VIBPH
AccessioniPrimary (citable) accession number: S5JRG4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: October 29, 2014
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3