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S5J6R5

- S5J6R5_VIBPH

UniProt

S5J6R5 - S5J6R5_VIBPH

Protein
Submitted name:

Alpha-amylase

Gene

M634_17540

Organism
Vibrio parahaemolyticus O1:Kuk str. FDA_R31
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (16 Oct 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    ORF Names:M634_17540Imported
    OrganismiVibrio parahaemolyticus O1:Kuk str. FDA_R31Imported
    Taxonomic identifieri1338034 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000014929: Chromosome II

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    S5J6R5-1 [UniParc]FASTAAdd to Basket

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    MKLNLITTTL LLVSASAIAE PNITISTTTN SRDFPLSVEQ PLVVPLTKDG    50
    YTLKITGVEG DCVAPDGQKV KFNKPIALNC GKPTELPLKV RFTGDYSFAY 100
    DDVVKTLLFK REPKKAAKTE FKRPIPQVQC EVYQGGEVTI ALGDSFPEGT 150
    KLRDAYSGQM VEVKEQKVSL TPSKDSGGLV LLEPVQKTKE AVPFDYRNAN 200
    IYFVMVDRFN NADASNDNSY GRKKDGKDEV GTFHGGDLKG VIEKLDYIKS 250
    LGTDAIWLSP IVEQVHGFVG GGDSGSFPFY AYHGYWTRDF TKIDENFGNE 300
    EDLKTLVEEA HKRGLKVLMD AVINHSGYST LADLQFDGID VLKPNAELPK 350
    KWGDWQPKAG ENWHSYHQNI DYQSPNWAKW WGGDWVRTGL PGYPAPGSSD 400
    ITMSLAGLPD FITESDKAVK PAQWLLDNPG TRVEARDNYT VSDYLIEWQT 450
    DWVKRFGIDG YRVDTVKHVE GEVWKRLKEE ASNSLEQWRK ENGKSGQPFW 500
    MMGEVWGHTA YRSPYFDDGF DALINFDMQK KLDKGAACFS QMADTYQSYA 550
    DTIANEKDFN PVSYMSSHDT ELFFSRFKDY GMQRNAANAL LLSPGAVQVY 600
    YGDEVGRNIG PYADDFHQGT RSDMVWKLSD DKQALLKHWQ TLGQFRQAHP 650
    AIGAGQHQVI EQEGAYVFSR LLGNDKVVVA FVGRDK 686
    Length:686
    Mass (Da):77,040
    Last modified:October 16, 2013 - v1
    Checksum:i7DA3202FA9ADBFF7
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006005 Genomic DNA. Translation: AGQ92716.1.
    RefSeqiWP_020841518.1. NC_021821.1.
    YP_008267852.1. NC_021821.1.

    Genome annotation databases

    EnsemblBacteriaiAGQ92716; AGQ92716; M634_17540.
    GeneIDi16894721.
    KEGGivpf:M634_17540.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006005 Genomic DNA. Translation: AGQ92716.1 .
    RefSeqi WP_020841518.1. NC_021821.1.
    YP_008267852.1. NC_021821.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGQ92716 ; AGQ92716 ; M634_17540 .
    GeneIDi 16894721.
    KEGGi vpf:M634_17540.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "100K Food-borne pathogen sequencing project."
      100K Food-borne pathogen sequencing consortium
      Jones J., Zhao S., Xie Y., Thao K., Dao N., Clark T.A., Boitano M., Korlach J., Weimer B.
      Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: FDA_R31Imported.

    Entry informationi

    Entry nameiS5J6R5_VIBPH
    AccessioniPrimary (citable) accession number: S5J6R5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 16, 2013
    Last sequence update: October 16, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3