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S5IP09

- S5IP09_VIBPH

UniProt

S5IP09 - S5IP09_VIBPH

Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Vibrio parahaemolyticus O1:Kuk str. FDA_R31
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (16 Oct 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Name:malSImported
    ORF Names:M634_01790Imported
    OrganismiVibrio parahaemolyticus O1:Kuk str. FDA_R31Imported
    Taxonomic identifieri1338034 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
    ProteomesiUP000014929: Chromosome I

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    S5IP09-1 [UniParc]FASTAAdd to Basket

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    MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEPNSD GLLVAEQKLE    50
    KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK 100
    ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVAQTFTDG 150
    TVVRDALTGQ EATVANGSVT MQPGPMSQGL LLLEEVEQQA DKPFSWDNAT 200
    VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES 250
    LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTE 300
    DELRTFVDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK 350
    QVLGEEWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD 400
    APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKNTNAQD ELKTPREHLI 450
    TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKARTTQALA EWKQNHPDKA 500
    LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL 550
    DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM 600
    LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ 650
    KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE 694
    Length:694
    Mass (Da):78,811
    Last modified:October 16, 2013 - v1
    Checksum:i3B1C7C12917F5D2F
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006004 Genomic DNA. Translation: AGQ89705.1.
    RefSeqiYP_008312291.1. NC_021847.1.

    Genome annotation databases

    EnsemblBacteriaiAGQ89705; AGQ89705; M634_01790.
    GeneIDi16896327.
    KEGGivpf:M634_01790.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006004 Genomic DNA. Translation: AGQ89705.1 .
    RefSeqi YP_008312291.1. NC_021847.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGQ89705 ; AGQ89705 ; M634_01790 .
    GeneIDi 16896327.
    KEGGi vpf:M634_01790.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "100K Food-borne pathogen sequencing project."
      100K Food-borne pathogen sequencing consortium
      Jones J., Zhao S., Xie Y., Thao K., Dao N., Clark T.A., Boitano M., Korlach J., Weimer B.
      Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: FDA_R31Imported.

    Entry informationi

    Entry nameiS5IP09_VIBPH
    AccessioniPrimary (citable) accession number: S5IP09
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 16, 2013
    Last sequence update: October 16, 2013
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3