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S5IP09

- S5IP09_VIBPH

UniProt

S5IP09 - S5IP09_VIBPH

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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Vibrio parahaemolyticus O1:Kuk str. FDA_R31
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:M634_01790Imported
OrganismiVibrio parahaemolyticus O1:Kuk str. FDA_R31Imported
Taxonomic identifieri1338034 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio
ProteomesiUP000014929: Chromosome I

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5IP09-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKKTILALSI GLLSACSQIP ENAIVLSVGD DTAVFEPNSD GLLVAEQKLE
60 70 80 90 100
KGNYTFTIAD SKQTCGNSFA LAEESRIKFN TPLKMDNCAT DTSMPLRIFK
110 120 130 140 150
ANTYLFTLNP DTNELTVKIK PKQSQDITYS CPVATDTAKT INVAQTFTDG
160 170 180 190 200
TVVRDALTGQ EATVANGSVT MQPGPMSQGL LLLEEVEQQA DKPFSWDNAT
210 220 230 240 250
VYFVMTDRFY NGNPDNDNSY GRSKDGKYEI GTFHGGDLAG LTKKLDYIES
260 270 280 290 300
LGVNAIWITS PLEQIHGWVG GGDKGDFKHY GYHGYYHQDW TKLDANMGTE
310 320 330 340 350
DELRTFVDTA HKKGIRVIWD VVMNHTGYAT LADMQEFGFG QLYLDDQEAK
360 370 380 390 400
QVLGEEWTDW QPKSGQSWHS FNDYIKYGDS EAWEKWWGKD WIRTDIGDYD
410 420 430 440 450
APGYNDITMS LNYLPDLKTE STQKTGLPNF FRNKNTNAQD ELKTPREHLI
460 470 480 490 500
TWLSDWVRDY GIDGFRVDTA KHVEMEAWAE LKARTTQALA EWKQNHPDKA
510 520 530 540 550
LDDLPFWMTG EVWAHSVVKS PYFDNGFDSI INFEFQSDVA PKALKCFAQL
560 570 580 590 600
DNDYRRYAER INSDPEFNVL SYLSSHDTQL FWSARSRSFD DQARAANALM
610 620 630 640 650
LAPGAVQIYY GDEIARDFGV TGSDPTQGTR SDMPWDKIHG EREDLLQHWQ
660 670 680 690
KLGEFRQRHP AVAQGKHITR NQEGYYAFER QYQDDKVLIV YTGE
Length:694
Mass (Da):78,811
Last modified:October 16, 2013 - v1
Checksum:i3B1C7C12917F5D2F
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006004 Genomic DNA. Translation: AGQ89705.1.
RefSeqiYP_008312291.1. NC_021847.1.

Genome annotation databases

EnsemblBacteriaiAGQ89705; AGQ89705; M634_01790.
GeneIDi16896327.
KEGGivpf:M634_01790.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006004 Genomic DNA. Translation: AGQ89705.1 .
RefSeqi YP_008312291.1. NC_021847.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGQ89705 ; AGQ89705 ; M634_01790 .
GeneIDi 16896327.
KEGGi vpf:M634_01790.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "100K Food-borne pathogen sequencing project."
    100K Food-borne pathogen sequencing consortium
    Jones J., Zhao S., Xie Y., Thao K., Dao N., Clark T.A., Boitano M., Korlach J., Weimer B.
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: FDA_R31Imported.

Entry informationi

Entry nameiS5IP09_VIBPH
AccessioniPrimary (citable) accession number: S5IP09
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: October 1, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3