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S5F174

- S5F174_PASHA

UniProt

S5F174 - S5F174_PASHA

Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Mannheimia haemolytica D171
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (16 Oct 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Name:malSImported
    ORF Names:J450_03665Imported
    OrganismiMannheimia haemolytica D171Imported
    Taxonomic identifieri1311759 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeMannheimia
    ProteomesiUP000014980: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.

    Sequencei

    Sequence statusi: Complete.

    S5F174-1 [UniParc]FASTAAdd to Basket

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    MKNALPYLCL FYTSSLFAQS WQHSHFSDFN DNLEKRLYQS QVQLEKGSYP    50
    LRFKFGEQCY QPQQAIKLNQ SVALVPCINE APQLRLFRQG NYLAQIDLRS 100
    GTPTLTISVE QQLQHNEAMF QSCPNWDKKP IEIDVSSTFA EGESVSDFYS 150
    GNTAIVKNGK VTLMPNENAS GLILLEKSNT ENTATFDWKN ATVYFVLTDR 200
    FYNGDPTNDH SYHRQKDGMQ EIGTFHGGDL KGLTEKLDYL QQLGVNVLWI 250
    SSPLEQMHGW VGGGDKGDFP HYGYHGYYHL DWTKLDANMG TEDDLSRFVQ 300
    QAHQRGIRVL FDVVMNHTGY ATLADMQEFN FGGFYLTPDE ISRTLGEKWT 350
    HWKPKSGQNW HSFNDFIRFN DNQAWQNWWG KEWVRADIAD YDSPKFDDLK 400
    MSLAALPDLK TESEQAVKLP EFFANKNTNA KTLPNAKVRD YLIGWLSDWV 450
    RKYGIDGFRV DTAKHVEKST WLVLKQSAQQ ALNEWQKANP NAGFNDRFWM 500
    TGEAWGHGVF KSDYYQNGFD AMINFDFQDQ AKQGLNCFAH IEPIYAEMNR 550
    KLSDFNVLSY LSSHDTRLFF HSDSEQNIEK HKTAANLLLL SPGAVQIYYG 600
    DESGRTFGAT GSDLIQGTRS DMNWQELQQD PQKQALHQHW QKLTQFRQRH 650
    PAIGAGVHQL IKNDSYFAFK RVLNEDKVMV VWAGN 685
    Length:685
    Mass (Da):78,857
    Last modified:October 16, 2013 - v1
    Checksum:i32797251FA31ED7C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006573 Genomic DNA. Translation: AGQ38277.1.
    RefSeqiWP_006252163.1. NC_021738.1.
    YP_008219786.1. NC_021738.1.

    Genome annotation databases

    EnsemblBacteriaiAGQ38277; AGQ38277; J450_03665.
    GeneIDi16859429.
    KEGGimham:J450_03665.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP006573 Genomic DNA. Translation: AGQ38277.1 .
    RefSeqi WP_006252163.1. NC_021738.1.
    YP_008219786.1. NC_021738.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGQ38277 ; AGQ38277 ; J450_03665 .
    GeneIDi 16859429.
    KEGGi mham:J450_03665.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequence of Mannheimia haemolytica serotype A2 from pneumonic bovine lung."
      Hauglund M.J., Tatum F.M., Bayles D.O., Chriswell B.O., Maheswaran S.K., Briggs R.E.
      Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: D171Imported.

    Entry informationi

    Entry nameiS5F174_PASHA
    AccessioniPrimary (citable) accession number: S5F174
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 16, 2013
    Last sequence update: October 16, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3