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S5F174

- S5F174_PASHA

UniProt

S5F174 - S5F174_PASHA

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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Mannheimia haemolytica D171
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:J450_03665Imported
OrganismiMannheimia haemolytica D171Imported
Taxonomic identifieri1311759 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPasteurellalesPasteurellaceaeMannheimia
ProteomesiUP000014980: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.

Sequencei

Sequence statusi: Complete.

S5F174-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MKNALPYLCL FYTSSLFAQS WQHSHFSDFN DNLEKRLYQS QVQLEKGSYP
60 70 80 90 100
LRFKFGEQCY QPQQAIKLNQ SVALVPCINE APQLRLFRQG NYLAQIDLRS
110 120 130 140 150
GTPTLTISVE QQLQHNEAMF QSCPNWDKKP IEIDVSSTFA EGESVSDFYS
160 170 180 190 200
GNTAIVKNGK VTLMPNENAS GLILLEKSNT ENTATFDWKN ATVYFVLTDR
210 220 230 240 250
FYNGDPTNDH SYHRQKDGMQ EIGTFHGGDL KGLTEKLDYL QQLGVNVLWI
260 270 280 290 300
SSPLEQMHGW VGGGDKGDFP HYGYHGYYHL DWTKLDANMG TEDDLSRFVQ
310 320 330 340 350
QAHQRGIRVL FDVVMNHTGY ATLADMQEFN FGGFYLTPDE ISRTLGEKWT
360 370 380 390 400
HWKPKSGQNW HSFNDFIRFN DNQAWQNWWG KEWVRADIAD YDSPKFDDLK
410 420 430 440 450
MSLAALPDLK TESEQAVKLP EFFANKNTNA KTLPNAKVRD YLIGWLSDWV
460 470 480 490 500
RKYGIDGFRV DTAKHVEKST WLVLKQSAQQ ALNEWQKANP NAGFNDRFWM
510 520 530 540 550
TGEAWGHGVF KSDYYQNGFD AMINFDFQDQ AKQGLNCFAH IEPIYAEMNR
560 570 580 590 600
KLSDFNVLSY LSSHDTRLFF HSDSEQNIEK HKTAANLLLL SPGAVQIYYG
610 620 630 640 650
DESGRTFGAT GSDLIQGTRS DMNWQELQQD PQKQALHQHW QKLTQFRQRH
660 670 680
PAIGAGVHQL IKNDSYFAFK RVLNEDKVMV VWAGN
Length:685
Mass (Da):78,857
Last modified:October 16, 2013 - v1
Checksum:i32797251FA31ED7C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006573 Genomic DNA. Translation: AGQ38277.1.
RefSeqiWP_006252163.1. NC_021738.1.
YP_008219786.1. NC_021738.1.

Genome annotation databases

EnsemblBacteriaiAGQ38277; AGQ38277; J450_03665.
GeneIDi16859429.
KEGGimham:J450_03665.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006573 Genomic DNA. Translation: AGQ38277.1 .
RefSeqi WP_006252163.1. NC_021738.1.
YP_008219786.1. NC_021738.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGQ38277 ; AGQ38277 ; J450_03665 .
GeneIDi 16859429.
KEGGi mham:J450_03665.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
ProtoNeti Search...

Publicationsi

  1. "Whole genome sequence of Mannheimia haemolytica serotype A2 from pneumonic bovine lung."
    Hauglund M.J., Tatum F.M., Bayles D.O., Chriswell B.O., Maheswaran S.K., Briggs R.E.
    Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: D171Imported.

Entry informationi

Entry nameiS5F174_PASHA
AccessioniPrimary (citable) accession number: S5F174
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: October 1, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3