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S5EKJ9 (S5EKJ9_SERLI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length496 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionGlycosidase EMBL AGQ30086.1
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionalpha-amylase activity

Inferred from electronic annotation. Source: UniProtKB-EC

calcium ion binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
S5EKJ9 [UniParc].

Last modified October 16, 2013. Version 1.
Checksum: B6757F4CA4B02EC7

FASTA49655,713
        10         20         30         40         50         60 
MTKKTTLLQF FHWYYPDGGK LWQEAAERAE QIAGIGITDL WLPPAYKGAS GGYSVGYDSY 

        70         80         90        100        110        120 
DLFDLGEFDQ KGSRATKYGD KEALALAANR LRDNGVRVIY DVVFNHKLGA DEKEQVHVYK 

       130        140        150        160        170        180 
ADANNRNDIN DQGFDALAYT RFTFPGRQGT YSKFIWDYKC FGGVDYVEQP DEKGVFKIAN 

       190        200        210        220        230        240 
DYGDDGWNDQ VGDEKGNYDY LMGADVEFRN PAVTEELKYW ARWLMETLPC NGFRLDAAKH 

       250        260        270        280        290        300 
IPAWFFKEWA DHVRDSAQRD LFIVAEYWSH DLAALQQYID LVEGKVMLFD VALHLKFHQA 

       310        320        330        340        350        360 
SKQGDGFDMA QIFTDTLTAA DPAHSVTLVA NHDTQPLQSL EAPVEPWFKP LAYALILLRE 

       370        380        390        400        410        420 
QGVPCVFYPD LYGASYKDKG SDGQEYQIDM PVIPELEKLI QARQRFANGV QTDYFDDKNC 

       430        440        450        460        470        480 
VAFTRSGTAD APGCVVVLTN GAESGKAVSL GDALAHKSWR DLLGNRQDEV ITDELGQATF 

       490 
PVNGGSVSVW VLAETL 

« Hide

References

[1]"Complete Genome Sequence of Serratia liquefaciens Strain ATCC 27592."
Nicholson W.L., Leonard M.T., Fajardo-Cavazos P., Panayotova N., Farmerie W.G., Triplett E.W., Schuerger A.C.
Genome Announc. 1:e00548-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ATCC 27592 EMBL AGQ30086.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP006252 Genomic DNA. Translation: AGQ30086.1.
RefSeqYP_008229234.1. NC_021741.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGQ30086; AGQ30086; M495_06395.
GeneID16902580.
KEGGslq:M495_06395.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameS5EKJ9_SERLI
AccessionPrimary (citable) accession number: S5EKJ9
Entry history
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)