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Protein
Submitted name:

Alpha-amylase

Gene

M495_06395

Organism
Serratia liquefaciens ATCC 27592
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei236 – 2361NucleophileUniRule annotation
Active sitei266 – 2661Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
ORF Names:M495_06395Imported
OrganismiSerratia liquefaciens ATCC 27592Imported
Taxonomic identifieri1346614 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeSerratia
ProteomesiUP000014922: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S5EKJ9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTKKTTLLQF FHWYYPDGGK LWQEAAERAE QIAGIGITDL WLPPAYKGAS
60 70 80 90 100
GGYSVGYDSY DLFDLGEFDQ KGSRATKYGD KEALALAANR LRDNGVRVIY
110 120 130 140 150
DVVFNHKLGA DEKEQVHVYK ADANNRNDIN DQGFDALAYT RFTFPGRQGT
160 170 180 190 200
YSKFIWDYKC FGGVDYVEQP DEKGVFKIAN DYGDDGWNDQ VGDEKGNYDY
210 220 230 240 250
LMGADVEFRN PAVTEELKYW ARWLMETLPC NGFRLDAAKH IPAWFFKEWA
260 270 280 290 300
DHVRDSAQRD LFIVAEYWSH DLAALQQYID LVEGKVMLFD VALHLKFHQA
310 320 330 340 350
SKQGDGFDMA QIFTDTLTAA DPAHSVTLVA NHDTQPLQSL EAPVEPWFKP
360 370 380 390 400
LAYALILLRE QGVPCVFYPD LYGASYKDKG SDGQEYQIDM PVIPELEKLI
410 420 430 440 450
QARQRFANGV QTDYFDDKNC VAFTRSGTAD APGCVVVLTN GAESGKAVSL
460 470 480 490
GDALAHKSWR DLLGNRQDEV ITDELGQATF PVNGGSVSVW VLAETL
Length:496
Mass (Da):55,713
Last modified:October 16, 2013 - v1
Checksum:iB6757F4CA4B02EC7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006252 Genomic DNA. Translation: AGQ30086.1.
RefSeqiWP_020825804.1. NC_021741.1.
YP_008229234.1. NC_021741.1.

Genome annotation databases

EnsemblBacteriaiAGQ30086; AGQ30086; M495_06395.
GeneIDi16902580.
KEGGislq:M495_06395.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP006252 Genomic DNA. Translation: AGQ30086.1.
RefSeqiWP_020825804.1. NC_021741.1.
YP_008229234.1. NC_021741.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGQ30086; AGQ30086; M495_06395.
GeneIDi16902580.
KEGGislq:M495_06395.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of Serratia liquefaciens Strain ATCC 27592."
    Nicholson W.L., Leonard M.T., Fajardo-Cavazos P., Panayotova N., Farmerie W.G., Triplett E.W., Schuerger A.C.
    Genome Announc. 1:e00548-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ATCC 27592Imported.

Entry informationi

Entry nameiS5EKJ9_SERLI
AccessioniPrimary (citable) accession number: S5EKJ9
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: February 4, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.