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S4ZJD3 (S4ZJD3_9MYCO) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length593 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
S4ZJD3 [UniParc].

Last modified October 16, 2013. Version 1.
Checksum: ECF4CC4D4DF3C086

FASTA59367,826
        10         20         30         40         50         60 
MDLMNDAKEA VEHHPEGGSH VQDGVVEHPD AEDFNNAAAL PTDPTWFKHA VFYEVLVRAF 

        70         80         90        100        110        120 
FDANADGAGD LRGLLGQLDY LQWLGIDCIW LPPFYDSPLR DGGYDIRDFY KVLPEFGTVE 

       130        140        150        160        170        180 
DFVALLNAAH ERGIRVITDL VMNHTSDSHP WFQESRHDPD GPYGDYYVWS DTSERYTDAR 

       190        200        210        220        230        240 
IIFIDTEESN WTFDPVRKQF YWHRFFSHQP DLNYENPAVQ EAMIDVLRFW LGLGIDGFRL 

       250        260        270        280        290        300 
DAVPYLFERE GTNCENLPET HAFLKRVRKV VDDEFPGRVL LAEANQWPAD VVEYFGDPST 

       310        320        330        340        350        360 
GGDECHMAFH FPLMPRIFMA VRRESRFPIS EILAQTPEIP DMAQWGIFLR NHDELTLEMV 

       370        380        390        400        410        420 
TDEERDYMYS EYAKDPRMKA NVGIRRRLAP LLDNDRNQIE LFTALLLSLP GSPVLYYGDE 

       430        440        450        460        470        480 
IGMGDVIWLG DRDGVRTPMQ WTPDRNAGFS KANPGRLYLP PSQDSVYGYQ AVNVEAQRDT 

       490        500        510        520        530        540 
STSLLNFTRT MLAVRRRHEA FAIGSFEELG GSNPSVLAFL RQVSGDGDTV LCVNNLSRFP 

       550        560        570        580        590 
QPIELNLQHW SGCTPVELTG QVEFPRIGHL PYLLTLPGHG FYWFRLSGCE EDA 

« Hide

References

[1]"Complete genome sequence of Mycobacterium novel species KCTC 19555."
Kim B.-J., Lee J.H., Lim J.-S., Choi I.-Y., Choi B.-S., Lim J.-S.
Submitted (FEB-2012) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 05-1390 EMBL AGP66570.1.
[2]"Whole-Genome Sequence of a Novel Species, Mycobacterium yongonense DSM 45126T."
Kim B.J., Kim B.R., Lee S.Y., Seok S.H., Kook Y.H., Kim B.J.
Genome Announc. 1:e00604-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 05-1390 EMBL AGP66570.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003347 Genomic DNA. Translation: AGP66570.1.
RefSeqYP_008190900.1. NC_021715.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGP66570; AGP66570; OEM_50350.
GeneID16467592.
KEGGmyo:OEM_50350.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameS4ZJD3_9MYCO
AccessionPrimary (citable) accession number: S4ZJD3
Entry history
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: June 11, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)