Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Xylose isomerase

Gene

xylA

Organism
Sorangium cellulosum So0157-2
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationNote: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei107UniRule annotation1
Active sitei110UniRule annotation1
Metal bindingi238Magnesium 1UniRule annotation1
Metal bindingi274Magnesium 1UniRule annotation1
Metal bindingi274Magnesium 2UniRule annotation1
Metal bindingi277Magnesium 2UniRule annotation1
Metal bindingi302Magnesium 1UniRule annotation1
Metal bindingi313Magnesium 2UniRule annotation1
Metal bindingi315Magnesium 2UniRule annotation1
Metal bindingi345Magnesium 1UniRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotationSAAS annotation (EC:5.3.1.5UniRule annotationSAAS annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:SCE1572_08390Imported
OrganismiSorangium cellulosum So0157-2Imported
Taxonomic identifieri1254432 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
Proteomesi
  • UP000014803 Componenti: Chromosome

Subcellular locationi

  • Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotationSAAS annotation

Phylogenomic databases

KOiK01805.
OrthoDBiPOG091H07LC.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

S4XMX3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTVVIGDKEY FPGVGKIPYE GPESDNPLAF KWYDEKRVVA GKAMKDHFKF
60 70 80 90 100
AVCYWHTFCG RGHDPFGPGT IHFPWDEGKD ALARARMKMD ASFEFITKLG
110 120 130 140 150
ATHYCFHDID LVEEGDSRAE TSRRLQSIVE YAKQKQAQSG IKLLWGTANL
160 170 180 190 200
FSNPRYMNGA STNPDFAVVA YAGAQLKDAL DATIALNGEN YVFWGGREGY
210 220 230 240 250
MSLLNTDMKR EKDHFARFLT LARDYARSRG FKGTFFIEPK PMEPSKHQYD
260 270 280 290 300
FDAETVIGFL RQHGLDKDFK LNLETNHATL AGHTMEHEMQ VAADAGMLGS
310 320 330 340 350
IDANRGDYQN AWDTDQFPYN INETVEMMLI LLRSGGLQGG GVNFDAKRRR
360 370 380 390 400
NSTDLIDTFH GHIGGMDVFA RALIIADDLI RKSPLEAMRK ARYASFDGGK
410 420 430 440
GAEFEQGKLT LEQLAEIGNA GGEVKLTSGQ QELYENIVNR YIR
Length:443
Mass (Da):49,802
Last modified:October 16, 2013 - v1
Checksum:i0956AD5FD46A82E9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003969 Genomic DNA. Translation: AGP34522.1.
RefSeqiWP_020733663.1. NC_021658.1.

Genome annotation databases

EnsemblBacteriaiAGP34522; AGP34522; SCE1572_08390.
KEGGiscu:SCE1572_08390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003969 Genomic DNA. Translation: AGP34522.1.
RefSeqiWP_020733663.1. NC_021658.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGP34522; AGP34522; SCE1572_08390.
KEGGiscu:SCE1572_08390.

Phylogenomic databases

KOiK01805.
OrthoDBiPOG091H07LC.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A. 1 hit.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiS4XMX3_SORCE
AccessioniPrimary (citable) accession number: S4XMX3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: November 30, 2016
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.