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S4XMX3

- S4XMX3_SORCE

UniProt

S4XMX3 - S4XMX3_SORCE

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Protein

Xylose isomerase

Gene
xylA, SCE1572_08390
Organism
Sorangium cellulosum So0157-2
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei107 – 1071 By similarityUniRule annotation
Active sitei110 – 1101 By similarityUniRule annotation
Metal bindingi238 – 2381Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 1 By similarityUniRule annotation
Metal bindingi274 – 2741Magnesium 2 By similarityUniRule annotation
Metal bindingi277 – 2771Magnesium 2 By similarityUniRule annotation
Metal bindingi302 – 3021Magnesium 1 By similarityUniRule annotation
Metal bindingi313 – 3131Magnesium 2 By similarityUniRule annotation
Metal bindingi315 – 3151Magnesium 2 By similarityUniRule annotation
Metal bindingi345 – 3451Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotation
ORF Names:SCE1572_08390Imported
OrganismiSorangium cellulosum So0157-2Imported
Taxonomic identifieri1254432 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
ProteomesiUP000014803: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

S4XMX3-1 [UniParc]FASTAAdd to Basket

« Hide

MTVVIGDKEY FPGVGKIPYE GPESDNPLAF KWYDEKRVVA GKAMKDHFKF    50
AVCYWHTFCG RGHDPFGPGT IHFPWDEGKD ALARARMKMD ASFEFITKLG 100
ATHYCFHDID LVEEGDSRAE TSRRLQSIVE YAKQKQAQSG IKLLWGTANL 150
FSNPRYMNGA STNPDFAVVA YAGAQLKDAL DATIALNGEN YVFWGGREGY 200
MSLLNTDMKR EKDHFARFLT LARDYARSRG FKGTFFIEPK PMEPSKHQYD 250
FDAETVIGFL RQHGLDKDFK LNLETNHATL AGHTMEHEMQ VAADAGMLGS 300
IDANRGDYQN AWDTDQFPYN INETVEMMLI LLRSGGLQGG GVNFDAKRRR 350
NSTDLIDTFH GHIGGMDVFA RALIIADDLI RKSPLEAMRK ARYASFDGGK 400
GAEFEQGKLT LEQLAEIGNA GGEVKLTSGQ QELYENIVNR YIR 443
Length:443
Mass (Da):49,802
Last modified:October 16, 2013 - v1
Checksum:i0956AD5FD46A82E9
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003969 Genomic DNA. Translation: AGP34522.1.
RefSeqiWP_020733663.1. NC_021658.1.
YP_008148129.1. NC_021658.1.

Genome annotation databases

EnsemblBacteriaiAGP34522; AGP34522; SCE1572_08390.
GeneIDi16058504.
KEGGiscu:SCE1572_08390.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003969 Genomic DNA. Translation: AGP34522.1 .
RefSeqi WP_020733663.1. NC_021658.1.
YP_008148129.1. NC_021658.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGP34522 ; AGP34522 ; SCE1572_08390 .
GeneIDi 16058504.
KEGGi scu:SCE1572_08390.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu."
    Han K., Li Z.F., Peng R., Zhu L.P., Zhou T., Wang L.G., Li S.G., Zhang X.B., Hu W., Wu Z.H., Qin N., Li Y.Z.
    Sci. Rep. 3:2101-2101(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: So0157-2Imported.

Entry informationi

Entry nameiS4XMX3_SORCE
AccessioniPrimary (citable) accession number: S4XMX3
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi