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S4XLV4

- S4XLV4_SORCE

UniProt

S4XLV4 - S4XLV4_SORCE

Protein
Submitted name:

Alpha-amylase

Gene

SCE1572_02785

Organism
Sorangium cellulosum So0157-2
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 8 (01 Oct 2014)
      Sequence version 1 (16 Oct 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. transferase activity, transferring phosphorus-containing groups Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    ORF Names:SCE1572_02785Imported
    OrganismiSorangium cellulosum So0157-2Imported
    Taxonomic identifieri1254432 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
    ProteomesiUP000014803: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK05343.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProiIPR002575. Aminoglycoside_PTrfase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF01636. APH. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.
    SSF56112. SSF56112. 2 hits.
    TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    S4XLV4-1 [UniParc]FASTAAdd to Basket

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    MSQDQKPPPA EGSALWYKDA IIYELHVRAF SDSNADGIGD FEGLVDKLDY     50
    LQDLGVTAIW LLPFYPSPLR DGGYDIADYA NINPSYGTRR EFARLLREAH 100
    RRDIRVITEL VLNHTSNEHE WFQRARTSPK GSRWRDFYVW SDTPHRYKDA 150
    RIIFKDFETS NWAWDPVANA YYWHRFYSHQ PDLNFENPEV HAAVFKVVDF 200
    WLEMGVDGLR LDAVPYLYER DGTNCENLPE THEFLRKLRR HIDANFSDRM 250
    LLAEANQWPA DAAAYFGNGD ECHMNFHFPL MPRMFMAVEL EDSFPIVNIL 300
    KQTPVVHETC QWATFLRNHD ELTLEMVTDE DRDYMYRVYA QEHTARINLG 350
    IRRRLAPLMK TRRRIELMNA LLFSLPGTPV LYYGDEIGMG DNIYLGDRDG 400
    VRTPMQWSAD RNAGFSRANP QKLYLPIIID PEYHYEAINV EAQQQNPASL 450
    LWWMKRLITL RKQNKVLGRG TIEFLHPDNN KVLAFIRAYG DERLLIVANL 500
    SRYAQHVELD LARFEGMVPV ELFGRSRFPE ITSRCYPLSL GPHDFFWFAL 550
    EPATPATSVG EAQAVPAIST RGSWRALLSP EGRRALEPAL GKFIAARRWF 600
    RGKARTRRAT TLADVIPIQR SEQTAAEHYL LLVRIEYTDG SPETYVVPIG 650
    FATGDSARTL ATRTRHAVIA DVTVRDPEPE AAAAPEGVLY DALTTPEFAA 700
    LILAAIRAQG VATGAAGELQ ALPFGATLEA LGAGGELPAR VAESEQSNTT 750
    IIYGDKLLLK IFRQVEEGIN PELEIGRFLT DHQFPATARL AGAIEYKGRG 800
    REPTTVAMLQ EYVQSQSDAW TSTLESLNRF FERVLTDEGS VKGSVPPMPA 850
    GTLVDASRAA PPPVVNQLMG TELVRMRLLG ERTAQLHLTL GGESKDPAFG 900
    QQPFTTLHQQ SIFQSAHGML SRTFTLLRKR ERSLPENVRE QVSAMLQREA 950
    EINAKLQQIV SRKFDVARIR THGDFHLGQV LSTGDDFILI DFEGEPARPL 1000
    SERRYKRGPL RDVGGMVRSF DYAGASALRD ARLRPEDVTV LKPWTDAWVA 1050
    WISASYLAGY LETIARAQAS AEPRADETAP YVPASDADTA LLLDFYQLEK 1100
    CIYEVGYELN NRPDWLDIPL RGLERLITPG V 1131
    Length:1,131
    Mass (Da):128,122
    Last modified:October 16, 2013 - v1
    Checksum:i7BF4F93F59DB3A62
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003969 Genomic DNA. Translation: AGP33524.1.
    RefSeqiWP_020732562.1. NC_021658.1.
    YP_008147025.1. NC_021658.1.

    Genome annotation databases

    EnsemblBacteriaiAGP33524; AGP33524; SCE1572_02785.
    GeneIDi16057391.
    KEGGiscu:SCE1572_02785.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003969 Genomic DNA. Translation: AGP33524.1 .
    RefSeqi WP_020732562.1. NC_021658.1.
    YP_008147025.1. NC_021658.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGP33524 ; AGP33524 ; SCE1572_02785 .
    GeneIDi 16057391.
    KEGGi scu:SCE1572_02785.

    Phylogenomic databases

    KOi K05343.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 2 hits.
    InterProi IPR002575. Aminoglycoside_PTrfase.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF01636. APH. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    SSF56112. SSF56112. 2 hits.
    TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu."
      Han K., Li Z.F., Peng R., Zhu L.P., Zhou T., Wang L.G., Li S.G., Zhang X.B., Hu W., Wu Z.H., Qin N., Li Y.Z.
      Sci. Rep. 3:2101-2101(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: So0157-2Imported.

    Entry informationi

    Entry nameiS4XLV4_SORCE
    AccessioniPrimary (citable) accession number: S4XLV4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: October 16, 2013
    Last sequence update: October 16, 2013
    Last modified: October 1, 2014
    This is version 8 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3