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Protein
Submitted name:

Alpha-amylase

Gene

SCE1572_02785

Organism
Sorangium cellulosum So0157-2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
ORF Names:SCE1572_02785Imported
OrganismiSorangium cellulosum So0157-2Imported
Taxonomic identifieri1254432 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium
ProteomesiUP000014803 Componenti: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

S4XLV4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSQDQKPPPA EGSALWYKDA IIYELHVRAF SDSNADGIGD FEGLVDKLDY
60 70 80 90 100
LQDLGVTAIW LLPFYPSPLR DGGYDIADYA NINPSYGTRR EFARLLREAH
110 120 130 140 150
RRDIRVITEL VLNHTSNEHE WFQRARTSPK GSRWRDFYVW SDTPHRYKDA
160 170 180 190 200
RIIFKDFETS NWAWDPVANA YYWHRFYSHQ PDLNFENPEV HAAVFKVVDF
210 220 230 240 250
WLEMGVDGLR LDAVPYLYER DGTNCENLPE THEFLRKLRR HIDANFSDRM
260 270 280 290 300
LLAEANQWPA DAAAYFGNGD ECHMNFHFPL MPRMFMAVEL EDSFPIVNIL
310 320 330 340 350
KQTPVVHETC QWATFLRNHD ELTLEMVTDE DRDYMYRVYA QEHTARINLG
360 370 380 390 400
IRRRLAPLMK TRRRIELMNA LLFSLPGTPV LYYGDEIGMG DNIYLGDRDG
410 420 430 440 450
VRTPMQWSAD RNAGFSRANP QKLYLPIIID PEYHYEAINV EAQQQNPASL
460 470 480 490 500
LWWMKRLITL RKQNKVLGRG TIEFLHPDNN KVLAFIRAYG DERLLIVANL
510 520 530 540 550
SRYAQHVELD LARFEGMVPV ELFGRSRFPE ITSRCYPLSL GPHDFFWFAL
560 570 580 590 600
EPATPATSVG EAQAVPAIST RGSWRALLSP EGRRALEPAL GKFIAARRWF
610 620 630 640 650
RGKARTRRAT TLADVIPIQR SEQTAAEHYL LLVRIEYTDG SPETYVVPIG
660 670 680 690 700
FATGDSARTL ATRTRHAVIA DVTVRDPEPE AAAAPEGVLY DALTTPEFAA
710 720 730 740 750
LILAAIRAQG VATGAAGELQ ALPFGATLEA LGAGGELPAR VAESEQSNTT
760 770 780 790 800
IIYGDKLLLK IFRQVEEGIN PELEIGRFLT DHQFPATARL AGAIEYKGRG
810 820 830 840 850
REPTTVAMLQ EYVQSQSDAW TSTLESLNRF FERVLTDEGS VKGSVPPMPA
860 870 880 890 900
GTLVDASRAA PPPVVNQLMG TELVRMRLLG ERTAQLHLTL GGESKDPAFG
910 920 930 940 950
QQPFTTLHQQ SIFQSAHGML SRTFTLLRKR ERSLPENVRE QVSAMLQREA
960 970 980 990 1000
EINAKLQQIV SRKFDVARIR THGDFHLGQV LSTGDDFILI DFEGEPARPL
1010 1020 1030 1040 1050
SERRYKRGPL RDVGGMVRSF DYAGASALRD ARLRPEDVTV LKPWTDAWVA
1060 1070 1080 1090 1100
WISASYLAGY LETIARAQAS AEPRADETAP YVPASDADTA LLLDFYQLEK
1110 1120 1130
CIYEVGYELN NRPDWLDIPL RGLERLITPG V
Length:1,131
Mass (Da):128,122
Last modified:October 16, 2013 - v1
Checksum:i7BF4F93F59DB3A62
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003969 Genomic DNA. Translation: AGP33524.1.
RefSeqiYP_008147025.1. NC_021658.1.

Genome annotation databases

EnsemblBacteriaiAGP33524; AGP33524; SCE1572_02785.
GeneIDi16057391.
KEGGiscu:SCE1572_02785.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003969 Genomic DNA. Translation: AGP33524.1.
RefSeqiYP_008147025.1. NC_021658.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGP33524; AGP33524; SCE1572_02785.
GeneIDi16057391.
KEGGiscu:SCE1572_02785.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu."
    Han K., Li Z.F., Peng R., Zhu L.P., Zhou T., Wang L.G., Li S.G., Zhang X.B., Hu W., Wu Z.H., Qin N., Li Y.Z.
    Sci. Rep. 3:2101-2101(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: So0157-2Imported.

Entry informationi

Entry nameiS4XLV4_SORCE
AccessioniPrimary (citable) accession number: S4XLV4
Entry historyi
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: April 1, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.