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S4XLV4 (S4XLV4_SORCE) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:SCE1572_02785 EMBL AGP33524.1
OrganismSorangium cellulosum So0157-2 [Complete proteome] EMBL AGP33524.1
Taxonomic identifier1254432 [NCBI]
Taxonomic lineageBacteriaProteobacteriaDeltaproteobacteriaMyxococcalesSorangiineaePolyangiaceaeSorangium

Protein attributes

Sequence length1131 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
S4XLV4 [UniParc].

Last modified October 16, 2013. Version 1.
Checksum: 7BF4F93F59DB3A62

FASTA1,131128,122
        10         20         30         40         50         60 
MSQDQKPPPA EGSALWYKDA IIYELHVRAF SDSNADGIGD FEGLVDKLDY LQDLGVTAIW 

        70         80         90        100        110        120 
LLPFYPSPLR DGGYDIADYA NINPSYGTRR EFARLLREAH RRDIRVITEL VLNHTSNEHE 

       130        140        150        160        170        180 
WFQRARTSPK GSRWRDFYVW SDTPHRYKDA RIIFKDFETS NWAWDPVANA YYWHRFYSHQ 

       190        200        210        220        230        240 
PDLNFENPEV HAAVFKVVDF WLEMGVDGLR LDAVPYLYER DGTNCENLPE THEFLRKLRR 

       250        260        270        280        290        300 
HIDANFSDRM LLAEANQWPA DAAAYFGNGD ECHMNFHFPL MPRMFMAVEL EDSFPIVNIL 

       310        320        330        340        350        360 
KQTPVVHETC QWATFLRNHD ELTLEMVTDE DRDYMYRVYA QEHTARINLG IRRRLAPLMK 

       370        380        390        400        410        420 
TRRRIELMNA LLFSLPGTPV LYYGDEIGMG DNIYLGDRDG VRTPMQWSAD RNAGFSRANP 

       430        440        450        460        470        480 
QKLYLPIIID PEYHYEAINV EAQQQNPASL LWWMKRLITL RKQNKVLGRG TIEFLHPDNN 

       490        500        510        520        530        540 
KVLAFIRAYG DERLLIVANL SRYAQHVELD LARFEGMVPV ELFGRSRFPE ITSRCYPLSL 

       550        560        570        580        590        600 
GPHDFFWFAL EPATPATSVG EAQAVPAIST RGSWRALLSP EGRRALEPAL GKFIAARRWF 

       610        620        630        640        650        660 
RGKARTRRAT TLADVIPIQR SEQTAAEHYL LLVRIEYTDG SPETYVVPIG FATGDSARTL 

       670        680        690        700        710        720 
ATRTRHAVIA DVTVRDPEPE AAAAPEGVLY DALTTPEFAA LILAAIRAQG VATGAAGELQ 

       730        740        750        760        770        780 
ALPFGATLEA LGAGGELPAR VAESEQSNTT IIYGDKLLLK IFRQVEEGIN PELEIGRFLT 

       790        800        810        820        830        840 
DHQFPATARL AGAIEYKGRG REPTTVAMLQ EYVQSQSDAW TSTLESLNRF FERVLTDEGS 

       850        860        870        880        890        900 
VKGSVPPMPA GTLVDASRAA PPPVVNQLMG TELVRMRLLG ERTAQLHLTL GGESKDPAFG 

       910        920        930        940        950        960 
QQPFTTLHQQ SIFQSAHGML SRTFTLLRKR ERSLPENVRE QVSAMLQREA EINAKLQQIV 

       970        980        990       1000       1010       1020 
SRKFDVARIR THGDFHLGQV LSTGDDFILI DFEGEPARPL SERRYKRGPL RDVGGMVRSF 

      1030       1040       1050       1060       1070       1080 
DYAGASALRD ARLRPEDVTV LKPWTDAWVA WISASYLAGY LETIARAQAS AEPRADETAP 

      1090       1100       1110       1120       1130 
YVPASDADTA LLLDFYQLEK CIYEVGYELN NRPDWLDIPL RGLERLITPG V 

« Hide

References

[1]"Extraordinary expansion of a Sorangium cellulosum genome from an alkaline milieu."
Han K., Li Z.F., Peng R., Zhu L.P., Zhou T., Wang L.G., Li S.G., Zhang X.B., Hu W., Wu Z.H., Qin N., Li Y.Z.
Sci. Rep. 3:2101-2101(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: So0157-2 EMBL AGP33524.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003969 Genomic DNA. Translation: AGP33524.1.
RefSeqYP_008147025.1. NC_021658.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGP33524; AGP33524; SCE1572_02785.
GeneID16057391.
KEGGscu:SCE1572_02785.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProIPR002575. Aminoglycoside_PTrfase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF01636. APH. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
SSF56112. SSF56112. 2 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameS4XLV4_SORCE
AccessionPrimary (citable) accession number: S4XLV4
Entry history
Integrated into UniProtKB/TrEMBL: October 16, 2013
Last sequence update: October 16, 2013
Last modified: June 11, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)