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Protein
Submitted name:

Efflux pump antibiotic resistance protein, major facilitator superfamily

Gene

Lpp225_1308

Organism
Lactobacillus paracasei subsp. paracasei Lpp225
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Efflux pump antibiotic resistance protein, major facilitator superfamilyImported
Gene namesi
ORF Names:Lpp225_1308Imported
OrganismiLactobacillus paracasei subsp. paracasei Lpp225Imported
Taxonomic identifieri1256225 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesLactobacillaceaeLactobacillus
Proteomesi
  • UP000014270 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei12 – 38HelicalSequence analysisAdd BLAST27
Transmembranei50 – 69HelicalSequence analysisAdd BLAST20
Transmembranei76 – 101HelicalSequence analysisAdd BLAST26
Transmembranei107 – 130HelicalSequence analysisAdd BLAST24
Transmembranei142 – 162HelicalSequence analysisAdd BLAST21
Transmembranei168 – 188HelicalSequence analysisAdd BLAST21
Transmembranei200 – 219HelicalSequence analysisAdd BLAST20
Transmembranei225 – 244HelicalSequence analysisAdd BLAST20
Transmembranei265 – 290HelicalSequence analysisAdd BLAST26
Transmembranei296 – 319HelicalSequence analysisAdd BLAST24
Transmembranei331 – 349HelicalSequence analysisAdd BLAST19
Transmembranei355 – 372HelicalSequence analysisAdd BLAST18
Transmembranei393 – 415HelicalSequence analysisAdd BLAST23
Transmembranei446 – 463HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini12 – 471MFSInterPro annotationAdd BLAST460

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiView protein in InterPro
IPR011701. MFS.
IPR020846. MFS_dom.
IPR036259. MFS_trans_sf.
PfamiView protein in Pfam
PF07690. MFS_1. 1 hit.
SUPFAMiSSF103473. SSF103473. 2 hits.
PROSITEiView protein in PROSITE
PS50850. MFS. 1 hit.

Sequencei

Sequence statusi: Complete.

S2NDE5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MITMSASRRW LILIATSIVS FMATLDASIV NIALPYIARE LKVPMSTVEL
60 70 80 90 100
VTSVYMIAIC VLLIFWGKLS DSVGRIWLFQ LGTILFALGS LFCGLSMTLP
110 120 130 140 150
WLLTARLIQA TGAAMTMATN FGIITAIFPM NQHGRALGVN SALLQLGNIA
160 170 180 190 200
GPGIGGGVLA VLSWHWIFLI NVPVALVAFL IGVLVFPRQR PSLAGAHMDW
210 220 230 240 250
PGYGSYSVII LGFFITVFWA QTAGLSWVTL LPGMLAFVAL VAFVQIERYA
260 270 280 290 300
SDPLIPFAIF KNPGFTIGIL TAMIVYMLGY FNSVIMPFYL EETLGLSALT
310 320 330 340 350
AGFCMMAIPA ANVISAPIGG NLGDHFGAER VSFFALFLWC VPMGLFAAAT
360 370 380 390 400
PNWPLGWIVF GLAWSGLANG AFQNNPMMMD NVAPKFQGLA GSMAALGRNL
410 420 430 440 450
GMTIGVALVT SLLYLNMSTQ AGRYIHDYPH GHPQWFIYGM HRSYDFALLL
460 470
LLLAVLLLGW LNLHRLHERK QSLS
Length:474
Mass (Da):51,568
Last modified:September 18, 2013 - v1
Checksum:iBEFCBC80AB40D251
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ANMM01000009 Genomic DNA. Translation: EPC37925.1.
RefSeqiWP_003564488.1. NZ_ANMM01000009.1.

Genome annotation databases

EnsemblBacteriaiEPC37925; EPC37925; Lpp225_1308.
GeneIDi31581729.
PATRICifig|1256225.3.peg.1369.

Similar proteinsi

Entry informationi

Entry nameiS2NDE5_LACPA
AccessioniPrimary (citable) accession number: S2NDE5
Entry historyiIntegrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: October 25, 2017
This is version 17 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteomeImported