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Protein
Submitted name:

Alpha amylase

Gene

Bl12_1463

Organism
Bifidobacterium animalis subsp. lactis Bl12
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. catalytic activity Source: InterPro
  2. cation binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha amylaseImported
Gene namesi
ORF Names:Bl12_1463Imported
OrganismiBifidobacterium animalis subsp. lactis Bl12Imported
Taxonomic identifieri1281781 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeBifidobacterialesBifidobacteriaceaeBifidobacterium
ProteomesiUP000014628: Chromosome

Structurei

3D structure databases

ProteinModelPortaliS0A7M3.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

S0A7M3-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MSSSHQVPQW LDQATFYEIY PQSFADSNAD GIGDIPGIIE HLDYLLQLGC
60 70 80 90 100
NAIWLNPLYE SPFRDAGYDI SDYKKVAARY GTNDDLAALF AAAHARGMHV
110 120 130 140 150
LLDLVPGHTS NEHPWFRQSA TDSPNLYDDR YIWTGNWIEG GDGLPFIGGE
160 170 180 190 200
EARDGAYIVN FFAFQPALNY GFAHPRKGWQ APALGDEALR TCDAMLDVMR
210 220 230 240 250
FWLDMGADGF RVDMADSLVK GDDEGKPYTI RTWQYMLGQI RGEYPEAAFV
260 270 280 290 300
SEWGRPDEAF EAGFDMDFYL DWRWDGVANG YSMLLRDTDT PMLRDGDHSY
310 320 330 340 350
FNADSGTSIV PFLGEYEPRL EAARKAHAYF DLITCNHDTM RLVPRLTTRE
360 370 380 390 400
LALAYSTIFL MPGVPFIYYG DEIGMRYRNL PGKEGGYTRT GSRTPMQWDN
410 420 430 440 450
SANHGFSQAA ADALYLPVDE REDAPTVAAA VADGNSLWHH MHAALEQRRS
460 470 480 490 500
TPAFAPDADF SVLFAEEGRR PFVFKRAKDG VSAIVAVNPG RDGETVTLPD
510 520 530
DDGSETRTIT LNIGGAVLDG TTLTLPPQSF AVLQ
Length:534
Mass (Da):59,488
Last modified:September 18, 2013 - v1
Checksum:i9C0A2A5077B9CCB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004053 Genomic DNA. Translation: AGO52981.1.
RefSeqiWP_004219257.1. NC_021593.1.
YP_008144294.1. NC_021593.1.

Genome annotation databases

EnsemblBacteriaiAGO52981; AGO52981; Bl12_1463.
GeneIDi16027688.
KEGGibani:Bl12_1463.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP004053 Genomic DNA. Translation: AGO52981.1.
RefSeqiWP_004219257.1. NC_021593.1.
YP_008144294.1. NC_021593.1.

3D structure databases

ProteinModelPortaliS0A7M3.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGO52981; AGO52981; Bl12_1463.
GeneIDi16027688.
KEGGibani:Bl12_1463.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 2 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Comparative Genomics of Bifidobacterium animalis subsp. lactis Reveals a Strict Monophyletic Bifidobacterial Taxon."
    Milani C., Duranti S., Lugli G.A., Bottacini F., Strati F., Arioli S., Foroni E., Turroni F., van Sinderen D., Ventura M.
    Appl. Environ. Microbiol. 79:4304-4315(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bl12Imported.

Entry informationi

Entry nameiS0A7M3_BIFAN
AccessioniPrimary (citable) accession number: S0A7M3
Entry historyi
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: January 7, 2015
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.