Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

R9V4H8

- R9V4H8_PSEPU

UniProt

R9V4H8 - R9V4H8_PSEPU

Protein
Submitted name:

Alpha-amylase

Gene

L483_22665

Organism
Pseudomonas putida H8234
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (18 Sep 2013)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. cation binding Source: InterPro
    2. transferase activity, transferring phosphorus-containing groups Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    ORF Names:L483_22665Imported
    OrganismiPseudomonas putida H8234Imported
    Taxonomic identifieri1331671 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
    ProteomesiUP000014263: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK05343.

    Family and domain databases

    Gene3Di2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProiIPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 2 hits.
    SSF56112. SSF56112. 1 hit.
    TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    R9V4H8-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKRSRPAAF IDDPLWYKDA VIYQLHIKSF FDSNNDGIGD FAGLISKLDY     50
    IAELGVNTLW LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFISEAH 100
    KRGLRVITEL VINHTSDQHP WFQRARHAKR GSKTRDFYVW SDDDQKYDGT 150
    RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ PDLNFDNPLV LKAVIGVMRF 200
    WLDLGVDGLR LDAIPYLIER DGTNNENLAE THAVLKAIRA EIDANYPDRM 250
    LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD 300
    ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN 350
    LGIRRRLAPL LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD 400
    RDGVRTPMQW SPDRNGGFSR ADPQRLVLPP IMDPLYGYQT VNVEAQSHDP 450
    HSLLNWTRRM LAVRKQQKAF GRGSLRTLTP SNRRILAYIR EYTDADGNTE 500
    VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG QLPFLLTLPP 550
    YAFYWFLLAS HDRMPSWHIQ ATEGLPELTT LVLRKRMEEL LEAPARETLQ 600
    TTILPQYLPK RRWFAGKEGP IDQVRLCYGV RFATATTPVL LSEIEVLGGG 650
    TANHYQLPFG LLPEDQINTA LPQQLALSRV RRAHQVGLIT DAFVLEPFIR 700
    AVLHACQNGL RLPCGSGAGE LRFECTDLLA ALGLNDESAV RYLSAEQSNS 750
    SVVIGDSVVL KLIRRVNPGI HPELEMSAYL TAAGFANISP LLAWVSRVDE 800
    QNAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDQMAPAG GDAEVHTDAL 850
    EELTGFAALF GQRLGEMHLL LAAPTDDEAF RPRPSDADDS QRWGAQISAE 900
    LTHALDLLAQ HRDALDSDSQ ALIDDLQQQR DGLAQHIASL ADQAEGGLLM 950
    RVHGDLHLGQ VLVVQGDAYL IDFEGEPSRP LQERRAKHSP YKDVSGVLRS 1000
    FDYAAAMILR SASAVDLSGP AQQARQRVAR QYLHQSRHAF VEAYGLATAA 1050
    MPHAWKMADG ERAALELFCL EKAAYEITYE AENRPTWLAV PLHGLHGLIS 1100
    TWGES 1105
    Length:1,105
    Mass (Da):124,733
    Last modified:September 18, 2013 - v1
    Checksum:i5AA46E9FC2D182A6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005976 Genomic DNA. Translation: AGN79752.1.
    RefSeqiYP_008096297.1. NC_021491.1.

    Genome annotation databases

    EnsemblBacteriaiAGN79752; AGN79752; L483_22665.
    GeneIDi16176716.
    KEGGipput:L483_22665.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005976 Genomic DNA. Translation: AGN79752.1 .
    RefSeqi YP_008096297.1. NC_021491.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGN79752 ; AGN79752 ; L483_22665 .
    GeneIDi 16176716.
    KEGGi pput:L483_22665.

    Phylogenomic databases

    KOi K05343.

    Family and domain databases

    Gene3Di 2.60.40.1180. 1 hit.
    3.20.20.80. 3 hits.
    InterProi IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR011009. Kinase-like_dom.
    IPR012810. TreS/a-amylase_N.
    IPR012811. TreS_maltokin_C_dom.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 2 hits.
    SSF56112. SSF56112. 1 hit.
    TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
    TIGR02456. treS_nterm. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234."
      Molina L., Bernal P., Udaondo Z., Segura A., Ramos J.L.
      Genome Announc. 1:E00496-13(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: H8234Imported.

    Entry informationi

    Entry nameiR9V4H8_PSEPU
    AccessioniPrimary (citable) accession number: R9V4H8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 18, 2013
    Last sequence update: September 18, 2013
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3