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Protein
Submitted name:

Alpha-amylase

Gene

L483_22665

Organism
Pseudomonas putida H8234
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
ORF Names:L483_22665Imported
OrganismiPseudomonas putida H8234Imported
Taxonomic identifieri1331671 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000014263: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

R9V4H8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKRSRPAAF IDDPLWYKDA VIYQLHIKSF FDSNNDGIGD FAGLISKLDY
60 70 80 90 100
IAELGVNTLW LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFISEAH
110 120 130 140 150
KRGLRVITEL VINHTSDQHP WFQRARHAKR GSKTRDFYVW SDDDQKYDGT
160 170 180 190 200
RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ PDLNFDNPLV LKAVIGVMRF
210 220 230 240 250
WLDLGVDGLR LDAIPYLIER DGTNNENLAE THAVLKAIRA EIDANYPDRM
260 270 280 290 300
LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD
310 320 330 340 350
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN
360 370 380 390 400
LGIRRRLAPL LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD
410 420 430 440 450
RDGVRTPMQW SPDRNGGFSR ADPQRLVLPP IMDPLYGYQT VNVEAQSHDP
460 470 480 490 500
HSLLNWTRRM LAVRKQQKAF GRGSLRTLTP SNRRILAYIR EYTDADGNTE
510 520 530 540 550
VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG QLPFLLTLPP
560 570 580 590 600
YAFYWFLLAS HDRMPSWHIQ ATEGLPELTT LVLRKRMEEL LEAPARETLQ
610 620 630 640 650
TTILPQYLPK RRWFAGKEGP IDQVRLCYGV RFATATTPVL LSEIEVLGGG
660 670 680 690 700
TANHYQLPFG LLPEDQINTA LPQQLALSRV RRAHQVGLIT DAFVLEPFIR
710 720 730 740 750
AVLHACQNGL RLPCGSGAGE LRFECTDLLA ALGLNDESAV RYLSAEQSNS
760 770 780 790 800
SVVIGDSVVL KLIRRVNPGI HPELEMSAYL TAAGFANISP LLAWVSRVDE
810 820 830 840 850
QNAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDQMAPAG GDAEVHTDAL
860 870 880 890 900
EELTGFAALF GQRLGEMHLL LAAPTDDEAF RPRPSDADDS QRWGAQISAE
910 920 930 940 950
LTHALDLLAQ HRDALDSDSQ ALIDDLQQQR DGLAQHIASL ADQAEGGLLM
960 970 980 990 1000
RVHGDLHLGQ VLVVQGDAYL IDFEGEPSRP LQERRAKHSP YKDVSGVLRS
1010 1020 1030 1040 1050
FDYAAAMILR SASAVDLSGP AQQARQRVAR QYLHQSRHAF VEAYGLATAA
1060 1070 1080 1090 1100
MPHAWKMADG ERAALELFCL EKAAYEITYE AENRPTWLAV PLHGLHGLIS

TWGES
Length:1,105
Mass (Da):124,733
Last modified:September 18, 2013 - v1
Checksum:i5AA46E9FC2D182A6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005976 Genomic DNA. Translation: AGN79752.1.
RefSeqiWP_016488165.1. NC_021491.1.
YP_008096297.1. NC_021491.1.

Genome annotation databases

EnsemblBacteriaiAGN79752; AGN79752; L483_22665.
GeneIDi16176716.
KEGGipput:L483_22665.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005976 Genomic DNA. Translation: AGN79752.1.
RefSeqiWP_016488165.1. NC_021491.1.
YP_008096297.1. NC_021491.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGN79752; AGN79752; L483_22665.
GeneIDi16176716.
KEGGipput:L483_22665.

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234."
    Molina L., Bernal P., Udaondo Z., Segura A., Ramos J.L.
    Genome Announc. 1:E00496-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H8234Imported.

Entry informationi

Entry nameiR9V4H8_PSEPU
AccessioniPrimary (citable) accession number: R9V4H8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: March 4, 2015
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.