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R9V4H8 (R9V4H8_PSEPU) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:L483_22665 EMBL AGN79752.1
OrganismPseudomonas putida H8234 [Complete proteome] EMBL AGN79752.1
Taxonomic identifier1331671 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas

Protein attributes

Sequence length1105 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
R9V4H8 [UniParc].

Last modified September 18, 2013. Version 1.
Checksum: 5AA46E9FC2D182A6

FASTA1,105124,733
        10         20         30         40         50         60 
MAKRSRPAAF IDDPLWYKDA VIYQLHIKSF FDSNNDGIGD FAGLISKLDY IAELGVNTLW 

        70         80         90        100        110        120 
LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFISEAH KRGLRVITEL VINHTSDQHP 

       130        140        150        160        170        180 
WFQRARHAKR GSKTRDFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ 

       190        200        210        220        230        240 
PDLNFDNPLV LKAVIGVMRF WLDLGVDGLR LDAIPYLIER DGTNNENLAE THAVLKAIRA 

       250        260        270        280        290        300 
EIDANYPDRM LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD 

       310        320        330        340        350        360 
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN LGIRRRLAPL 

       370        380        390        400        410        420 
LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD RDGVRTPMQW SPDRNGGFSR 

       430        440        450        460        470        480 
ADPQRLVLPP IMDPLYGYQT VNVEAQSHDP HSLLNWTRRM LAVRKQQKAF GRGSLRTLTP 

       490        500        510        520        530        540 
SNRRILAYIR EYTDADGNTE VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG 

       550        560        570        580        590        600 
QLPFLLTLPP YAFYWFLLAS HDRMPSWHIQ ATEGLPELTT LVLRKRMEEL LEAPARETLQ 

       610        620        630        640        650        660 
TTILPQYLPK RRWFAGKEGP IDQVRLCYGV RFATATTPVL LSEIEVLGGG TANHYQLPFG 

       670        680        690        700        710        720 
LLPEDQINTA LPQQLALSRV RRAHQVGLIT DAFVLEPFIR AVLHACQNGL RLPCGSGAGE 

       730        740        750        760        770        780 
LRFECTDLLA ALGLNDESAV RYLSAEQSNS SVVIGDSVVL KLIRRVNPGI HPELEMSAYL 

       790        800        810        820        830        840 
TAAGFANISP LLAWVSRVDE QNAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDQMAPAG 

       850        860        870        880        890        900 
GDAEVHTDAL EELTGFAALF GQRLGEMHLL LAAPTDDEAF RPRPSDADDS QRWGAQISAE 

       910        920        930        940        950        960 
LTHALDLLAQ HRDALDSDSQ ALIDDLQQQR DGLAQHIASL ADQAEGGLLM RVHGDLHLGQ 

       970        980        990       1000       1010       1020 
VLVVQGDAYL IDFEGEPSRP LQERRAKHSP YKDVSGVLRS FDYAAAMILR SASAVDLSGP 

      1030       1040       1050       1060       1070       1080 
AQQARQRVAR QYLHQSRHAF VEAYGLATAA MPHAWKMADG ERAALELFCL EKAAYEITYE 

      1090       1100 
AENRPTWLAV PLHGLHGLIS TWGES 

« Hide

References

[1]"Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234."
Molina L., Bernal P., Udaondo Z., Segura A., Ramos J.L.
Genome Announc. 1:E00496-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: H8234 EMBL AGN79752.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005976 Genomic DNA. Translation: AGN79752.1.
RefSeqYP_008096297.1. NC_021491.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGN79752; AGN79752; L483_22665.
GeneID16176716.
KEGGpput:L483_22665.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR9V4H8_PSEPU
AccessionPrimary (citable) accession number: R9V4H8
Entry history
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)