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R9V4H8

- R9V4H8_PSEPU

UniProt

R9V4H8 - R9V4H8_PSEPU

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Protein
Submitted name: Alpha-amylase
Gene
L483_22665
Organism
Pseudomonas putida H8234
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. cation binding Source: InterPro
  2. transferase activity, transferring phosphorus-containing groups Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
ORF Names:L483_22665Imported
OrganismiPseudomonas putida H8234Imported
Taxonomic identifieri1331671 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaPseudomonadalesPseudomonadaceaePseudomonas
ProteomesiUP000014263: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK05343.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProiIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsiTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.

Sequencei

Sequence statusi: Complete.

R9V4H8-1 [UniParc]FASTAAdd to Basket

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MAKRSRPAAF IDDPLWYKDA VIYQLHIKSF FDSNNDGIGD FAGLISKLDY     50
IAELGVNTLW LLPFYPSPRR DDGYDIAEYK AVHPDYGSMA DARRFISEAH 100
KRGLRVITEL VINHTSDQHP WFQRARHAKR GSKTRDFYVW SDDDQKYDGT 150
RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ PDLNFDNPLV LKAVIGVMRF 200
WLDLGVDGLR LDAIPYLIER DGTNNENLAE THAVLKAIRA EIDANYPDRM 250
LLAEANQWPE DTRPYFGEGD GDECHMAFHF PLMPRMYMAL AMEDRFPITD 300
ILRQTPEIPA NCQWAIFLRN HDELTLEMVT DRERDYLWNY YAEDRRARIN 350
LGIRRRLAPL LQRDRRRIEL LTSLLLSMPG TPTLYYGDEL GMGDNIYLGD 400
RDGVRTPMQW SPDRNGGFSR ADPQRLVLPP IMDPLYGYQT VNVEAQSHDP 450
HSLLNWTRRM LAVRKQQKAF GRGSLRTLTP SNRRILAYIR EYTDADGNTE 500
VILCVANVSR AAQAAELELS QYADKVPVEM LGGSAFPPIG QLPFLLTLPP 550
YAFYWFLLAS HDRMPSWHIQ ATEGLPELTT LVLRKRMEEL LEAPARETLQ 600
TTILPQYLPK RRWFAGKEGP IDQVRLCYGV RFATATTPVL LSEIEVLGGG 650
TANHYQLPFG LLPEDQINTA LPQQLALSRV RRAHQVGLIT DAFVLEPFIR 700
AVLHACQNGL RLPCGSGAGE LRFECTDLLA ALGLNDESAV RYLSAEQSNS 750
SVVIGDSVVL KLIRRVNPGI HPELEMSAYL TAAGFANISP LLAWVSRVDE 800
QNAPHLLMIA QGYLSNQGDA WAWTQNTLER AIRDQMAPAG GDAEVHTDAL 850
EELTGFAALF GQRLGEMHLL LAAPTDDEAF RPRPSDADDS QRWGAQISAE 900
LTHALDLLAQ HRDALDSDSQ ALIDDLQQQR DGLAQHIASL ADQAEGGLLM 950
RVHGDLHLGQ VLVVQGDAYL IDFEGEPSRP LQERRAKHSP YKDVSGVLRS 1000
FDYAAAMILR SASAVDLSGP AQQARQRVAR QYLHQSRHAF VEAYGLATAA 1050
MPHAWKMADG ERAALELFCL EKAAYEITYE AENRPTWLAV PLHGLHGLIS 1100
TWGES 1105
Length:1,105
Mass (Da):124,733
Last modified:September 18, 2013 - v1
Checksum:i5AA46E9FC2D182A6
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005976 Genomic DNA. Translation: AGN79752.1.
RefSeqiYP_008096297.1. NC_021491.1.

Genome annotation databases

EnsemblBacteriaiAGN79752; AGN79752; L483_22665.
GeneIDi16176716.
KEGGipput:L483_22665.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005976 Genomic DNA. Translation: AGN79752.1 .
RefSeqi YP_008096297.1. NC_021491.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGN79752 ; AGN79752 ; L483_22665 .
GeneIDi 16176716.
KEGGi pput:L483_22665.

Phylogenomic databases

KOi K05343.

Family and domain databases

Gene3Di 2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProi IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 1 hit.
TIGRFAMsi TIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of a Pseudomonas putida Clinical Isolate, Strain H8234."
    Molina L., Bernal P., Udaondo Z., Segura A., Ramos J.L.
    Genome Announc. 1:E00496-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: H8234Imported.

Entry informationi

Entry nameiR9V4H8_PSEPU
AccessioniPrimary (citable) accession number: R9V4H8
Entry historyi
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: September 3, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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