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R9U359

- R9U359_BACLI

UniProt

R9U359 - R9U359_BACLI

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Protein
Xylose isomerase
Gene
xylA, BaLi_c40600
Organism
Bacillus licheniformis 9945A
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotations

Cofactori

Binds 2 magnesium ions per subunit By similarity.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei120 – 1201 By similarityUniRule annotation
Active sitei123 – 1231 By similarityUniRule annotation
Metal bindingi251 – 2511Magnesium 1 By similarityUniRule annotation
Metal bindingi287 – 2871Magnesium 1 By similarityUniRule annotation
Metal bindingi287 – 2871Magnesium 2 By similarityUniRule annotation
Metal bindingi290 – 2901Magnesium 2 By similarityUniRule annotation
Metal bindingi315 – 3151Magnesium 1 By similarityUniRule annotation
Metal bindingi326 – 3261Magnesium 2 By similarityUniRule annotation
Metal bindingi328 – 3281Magnesium 2 By similarityUniRule annotation
Metal bindingi358 – 3581Magnesium 1 By similarityUniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP
Complete GO annotation...

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotationsImported

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotations, Xylose metabolismUniRule annotationSAAS annotations

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotations, Metal-bindingUniRule annotationSAAS annotations

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotationImported
ORF Names:BaLi_c40600Imported
OrganismiBacillus licheniformis 9945AImported
Taxonomic identifieri766760 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000014068: Chromosome

Subcellular locationi

Cytoplasm By similarity UniRule annotationSAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotations

Interactioni

Subunit structurei

Homotetramer By similarity.UniRule annotationSAAS annotations

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

R9U359-1 [UniParc]FASTAAdd to Basket

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MVKQTCYLTF ALQGKVKGEI GMFFKNVGMI EYEGADSENP YAFKYYNPDE    50
YVGGKTMKEH LRFAVAYWHT FDADGKDPFG DGTMFRAWNR MTHPLDKAKA 100
RAEAAFEFFE KLGVPYFCFH DVDIVDEGAT LRETFAYLDQ MSSFLKEMME 150
TSRVQLLWNT ANMFTHPRYV HGAATSCNAD VYAYAAAKVK KGLDIAKELG 200
AENYVFWGGR EGYETLLNTD MKLELENLAS FYRMAVEYAR EIGFDGQFLI 250
EPKPKEPTKH QYDFDAATTI AFLETYGLKD HFKLNLEANH ATLAGHTFEH 300
ELRVAALHDV LGSIDANQGD LLLGWDTDEF PTDLYSAVLA MYEILKAGGF 350
KTGGINFDAK VRRPSFADED LFHAHIAGMD TYAVGLKVAS RLLEDKALDQ 400
VIEERYESYT KGIGLEIKEG RTDLKKLAAY ALEHDQIENQ SGRQERLKAT 450
VNRYLLNALR EAPAEKETR 469
Length:469
Mass (Da):53,240
Last modified:September 18, 2013 - v1
Checksum:iAAB392A39DCD8CBE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005965 Genomic DNA. Translation: AGN38372.1.
RefSeqiWP_020453369.1. NC_021362.1.
YP_008080109.1. NC_021362.1.

Genome annotation databases

EnsemblBacteriaiAGN38372; AGN38372; BaLi_c40600.
GeneIDi16055063.
KEGGiblh:BaLi_c40600.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005965 Genomic DNA. Translation: AGN38372.1 .
RefSeqi WP_020453369.1. NC_021362.1.
YP_008080109.1. NC_021362.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGN38372 ; AGN38372 ; BaLi_c40600 .
GeneIDi 16055063.
KEGGi blh:BaLi_c40600.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A."
    Rachinger M., Volland S., Meinhardt F., Daniel R., Liesegang H.
    Genome Announc. 1:e00525-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9945AImported.

Entry informationi

Entry nameiR9U359_BACLI
AccessioniPrimary (citable) accession number: R9U359
Entry historyi
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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