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R9U359

- R9U359_BACLI

UniProt

R9U359 - R9U359_BACLI

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Protein

Xylose isomerase

Gene

xylA

Organism
Bacillus licheniformis 9945A
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

Cofactori

Note: Binds 2 magnesium ions per subunit.UniRule annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei120 – 1201UniRule annotation
Active sitei123 – 1231UniRule annotation
Metal bindingi251 – 2511Magnesium 1UniRule annotation
Metal bindingi287 – 2871Magnesium 1UniRule annotation
Metal bindingi287 – 2871Magnesium 2UniRule annotation
Metal bindingi290 – 2901Magnesium 2UniRule annotation
Metal bindingi315 – 3151Magnesium 1UniRule annotation
Metal bindingi326 – 3261Magnesium 2UniRule annotation
Metal bindingi328 – 3281Magnesium 2UniRule annotation
Metal bindingi358 – 3581Magnesium 1UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. xylose isomerase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-xylose metabolic process Source: UniProtKB-HAMAP
  2. pentose-phosphate shunt Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotation

Keywords - Biological processi

Carbohydrate metabolism, Pentose shuntUniRule annotation, Xylose metabolismUniRule annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
Gene namesi
Name:xylAUniRule annotationImported
ORF Names:BaLi_c40600Imported
OrganismiBacillus licheniformis 9945AImported
Taxonomic identifieri766760 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000014068: Chromosome

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Homotetramer.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the xylose isomerase family.UniRule annotation

Phylogenomic databases

KOiK01805.

Family and domain databases

Gene3Di3.20.20.150. 1 hit.
HAMAPiMF_00455. Xylose_isom_A.
InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamiPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSiPR00688. XYLOSISMRASE.
SUPFAMiSSF51658. SSF51658. 1 hit.
TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

R9U359-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MVKQTCYLTF ALQGKVKGEI GMFFKNVGMI EYEGADSENP YAFKYYNPDE
60 70 80 90 100
YVGGKTMKEH LRFAVAYWHT FDADGKDPFG DGTMFRAWNR MTHPLDKAKA
110 120 130 140 150
RAEAAFEFFE KLGVPYFCFH DVDIVDEGAT LRETFAYLDQ MSSFLKEMME
160 170 180 190 200
TSRVQLLWNT ANMFTHPRYV HGAATSCNAD VYAYAAAKVK KGLDIAKELG
210 220 230 240 250
AENYVFWGGR EGYETLLNTD MKLELENLAS FYRMAVEYAR EIGFDGQFLI
260 270 280 290 300
EPKPKEPTKH QYDFDAATTI AFLETYGLKD HFKLNLEANH ATLAGHTFEH
310 320 330 340 350
ELRVAALHDV LGSIDANQGD LLLGWDTDEF PTDLYSAVLA MYEILKAGGF
360 370 380 390 400
KTGGINFDAK VRRPSFADED LFHAHIAGMD TYAVGLKVAS RLLEDKALDQ
410 420 430 440 450
VIEERYESYT KGIGLEIKEG RTDLKKLAAY ALEHDQIENQ SGRQERLKAT
460
VNRYLLNALR EAPAEKETR
Length:469
Mass (Da):53,240
Last modified:September 18, 2013 - v1
Checksum:iAAB392A39DCD8CBE
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005965 Genomic DNA. Translation: AGN38372.1.
RefSeqiWP_020453369.1. NC_021362.1.
YP_008080109.1. NC_021362.1.

Genome annotation databases

EnsemblBacteriaiAGN38372; AGN38372; BaLi_c40600.
GeneIDi16055063.
KEGGiblh:BaLi_c40600.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005965 Genomic DNA. Translation: AGN38372.1 .
RefSeqi WP_020453369.1. NC_021362.1.
YP_008080109.1. NC_021362.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGN38372 ; AGN38372 ; BaLi_c40600 .
GeneIDi 16055063.
KEGGi blh:BaLi_c40600.

Phylogenomic databases

KOi K01805.

Family and domain databases

Gene3Di 3.20.20.150. 1 hit.
HAMAPi MF_00455. Xylose_isom_A.
InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view ]
Pfami PF01261. AP_endonuc_2. 1 hit.
[Graphical view ]
PRINTSi PR00688. XYLOSISMRASE.
SUPFAMi SSF51658. SSF51658. 1 hit.
TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A."
    Rachinger M., Volland S., Meinhardt F., Daniel R., Liesegang H.
    Genome Announc. 1:e00525-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: 9945AImported.

Entry informationi

Entry nameiR9U359_BACLI
AccessioniPrimary (citable) accession number: R9U359
Entry historyi
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: November 26, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3