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R9U359

- R9U359_BACLI

UniProt

R9U359 - R9U359_BACLI

Protein

Xylose isomerase

Gene

xylA

Organism
Bacillus licheniformis 9945A
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (18 Sep 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    D-xylopyranose = D-xylulose.UniRule annotationSAAS annotation

    Cofactori

    Binds 2 magnesium ions per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei120 – 1201UniRule annotation
    Active sitei123 – 1231UniRule annotation
    Metal bindingi251 – 2511Magnesium 1UniRule annotation
    Metal bindingi287 – 2871Magnesium 1UniRule annotation
    Metal bindingi287 – 2871Magnesium 2UniRule annotation
    Metal bindingi290 – 2901Magnesium 2UniRule annotation
    Metal bindingi315 – 3151Magnesium 1UniRule annotation
    Metal bindingi326 – 3261Magnesium 2UniRule annotation
    Metal bindingi328 – 3281Magnesium 2UniRule annotation
    Metal bindingi358 – 3581Magnesium 1UniRule annotation

    GO - Molecular functioni

    1. magnesium ion binding Source: UniProtKB-HAMAP
    2. xylose isomerase activity Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-xylose metabolic process Source: UniProtKB-HAMAP
    2. pentose-phosphate shunt Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Biological processi

    Carbohydrate metabolism, Pentose shuntUniRule annotationSAAS annotation, Xylose metabolismUniRule annotationSAAS annotation

    Keywords - Ligandi

    MagnesiumUniRule annotationSAAS annotation, Metal-bindingUniRule annotationSAAS annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Xylose isomeraseUniRule annotation (EC:5.3.1.5UniRule annotation)
    Gene namesi
    Name:xylAUniRule annotationImported
    ORF Names:BaLi_c40600Imported
    OrganismiBacillus licheniformis 9945AImported
    Taxonomic identifieri766760 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000014068: Chromosome

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Homotetramer.UniRule annotationSAAS annotation

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the xylose isomerase family.UniRule annotation

    Phylogenomic databases

    KOiK01805.

    Family and domain databases

    Gene3Di3.20.20.150. 1 hit.
    HAMAPiMF_00455. Xylose_isom_A.
    InterProiIPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view]
    PfamiPF01261. AP_endonuc_2. 1 hit.
    [Graphical view]
    PRINTSiPR00688. XYLOSISMRASE.
    SUPFAMiSSF51658. SSF51658. 1 hit.
    TIGRFAMsiTIGR02630. xylose_isom_A. 1 hit.
    PROSITEiPS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    R9U359-1 [UniParc]FASTAAdd to Basket

    « Hide

    MVKQTCYLTF ALQGKVKGEI GMFFKNVGMI EYEGADSENP YAFKYYNPDE    50
    YVGGKTMKEH LRFAVAYWHT FDADGKDPFG DGTMFRAWNR MTHPLDKAKA 100
    RAEAAFEFFE KLGVPYFCFH DVDIVDEGAT LRETFAYLDQ MSSFLKEMME 150
    TSRVQLLWNT ANMFTHPRYV HGAATSCNAD VYAYAAAKVK KGLDIAKELG 200
    AENYVFWGGR EGYETLLNTD MKLELENLAS FYRMAVEYAR EIGFDGQFLI 250
    EPKPKEPTKH QYDFDAATTI AFLETYGLKD HFKLNLEANH ATLAGHTFEH 300
    ELRVAALHDV LGSIDANQGD LLLGWDTDEF PTDLYSAVLA MYEILKAGGF 350
    KTGGINFDAK VRRPSFADED LFHAHIAGMD TYAVGLKVAS RLLEDKALDQ 400
    VIEERYESYT KGIGLEIKEG RTDLKKLAAY ALEHDQIENQ SGRQERLKAT 450
    VNRYLLNALR EAPAEKETR 469
    Length:469
    Mass (Da):53,240
    Last modified:September 18, 2013 - v1
    Checksum:iAAB392A39DCD8CBE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005965 Genomic DNA. Translation: AGN38372.1.
    RefSeqiWP_020453369.1. NC_021362.1.
    YP_008080109.1. NC_021362.1.

    Genome annotation databases

    EnsemblBacteriaiAGN38372; AGN38372; BaLi_c40600.
    GeneIDi16055063.
    KEGGiblh:BaLi_c40600.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005965 Genomic DNA. Translation: AGN38372.1 .
    RefSeqi WP_020453369.1. NC_021362.1.
    YP_008080109.1. NC_021362.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGN38372 ; AGN38372 ; BaLi_c40600 .
    GeneIDi 16055063.
    KEGGi blh:BaLi_c40600.

    Phylogenomic databases

    KOi K01805.

    Family and domain databases

    Gene3Di 3.20.20.150. 1 hit.
    HAMAPi MF_00455. Xylose_isom_A.
    InterProi IPR013022. Xyl_isomerase-like_TIM-brl.
    IPR013452. Xylose_isom_bac.
    IPR001998. Xylose_isomerase.
    [Graphical view ]
    Pfami PF01261. AP_endonuc_2. 1 hit.
    [Graphical view ]
    PRINTSi PR00688. XYLOSISMRASE.
    SUPFAMi SSF51658. SSF51658. 1 hit.
    TIGRFAMsi TIGR02630. xylose_isom_A. 1 hit.
    PROSITEi PS51415. XYLOSE_ISOMERASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A."
      Rachinger M., Volland S., Meinhardt F., Daniel R., Liesegang H.
      Genome Announc. 1:e00525-13(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: 9945AImported.

    Entry informationi

    Entry nameiR9U359_BACLI
    AccessioniPrimary (citable) accession number: R9U359
    Entry historyi
    Integrated into UniProtKB/TrEMBL: September 18, 2013
    Last sequence update: September 18, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3