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R9U359 (R9U359_BACLI) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 7. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length469 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

D-xylopyranose = D-xylulose. RuleBase RU000609 HAMAP-Rule MF_00455 SAAS SAAS001998

Cofactor

Binds 2 magnesium ions per subunit By similarity. HAMAP-Rule MF_00455

Subunit structure

Homotetramer By similarity. HAMAP-Rule MF_00455 SAAS SAAS001998

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00455 SAAS SAAS001998.

Sequence similarities

Belongs to the xylose isomerase family. RuleBase RU000609 HAMAP-Rule MF_00455

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site1201 By similarity HAMAP-Rule MF_00455
Active site1231 By similarity HAMAP-Rule MF_00455
Metal binding2511Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2871Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding2871Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding2901Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3151Magnesium 1 By similarity HAMAP-Rule MF_00455
Metal binding3261Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3281Magnesium 2 By similarity HAMAP-Rule MF_00455
Metal binding3581Magnesium 1 By similarity HAMAP-Rule MF_00455

Sequences

Sequence LengthMass (Da)Tools
R9U359 [UniParc].

Last modified September 18, 2013. Version 1.
Checksum: AAB392A39DCD8CBE

FASTA46953,240
        10         20         30         40         50         60 
MVKQTCYLTF ALQGKVKGEI GMFFKNVGMI EYEGADSENP YAFKYYNPDE YVGGKTMKEH 

        70         80         90        100        110        120 
LRFAVAYWHT FDADGKDPFG DGTMFRAWNR MTHPLDKAKA RAEAAFEFFE KLGVPYFCFH 

       130        140        150        160        170        180 
DVDIVDEGAT LRETFAYLDQ MSSFLKEMME TSRVQLLWNT ANMFTHPRYV HGAATSCNAD 

       190        200        210        220        230        240 
VYAYAAAKVK KGLDIAKELG AENYVFWGGR EGYETLLNTD MKLELENLAS FYRMAVEYAR 

       250        260        270        280        290        300 
EIGFDGQFLI EPKPKEPTKH QYDFDAATTI AFLETYGLKD HFKLNLEANH ATLAGHTFEH 

       310        320        330        340        350        360 
ELRVAALHDV LGSIDANQGD LLLGWDTDEF PTDLYSAVLA MYEILKAGGF KTGGINFDAK 

       370        380        390        400        410        420 
VRRPSFADED LFHAHIAGMD TYAVGLKVAS RLLEDKALDQ VIEERYESYT KGIGLEIKEG 

       430        440        450        460 
RTDLKKLAAY ALEHDQIENQ SGRQERLKAT VNRYLLNALR EAPAEKETR 

« Hide

References

[1]"First Insights into the Completely Annotated Genome Sequence of Bacillus licheniformis Strain 9945A."
Rachinger M., Volland S., Meinhardt F., Daniel R., Liesegang H.
Genome Announc. 1:e00525-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: 9945A EMBL AGN38372.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005965 Genomic DNA. Translation: AGN38372.1.
RefSeqYP_008080109.1. NC_021362.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGN38372; AGN38372; BaLi_c40600.
GeneID16055063.
KEGGblh:BaLi_c40600.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01805.

Family and domain databases

Gene3D3.20.20.150. 1 hit.
HAMAPMF_00455. Xylose_isom_A.
InterProIPR013022. Xyl_isomerase-like_TIM-brl.
IPR013452. Xylose_isom_bac.
IPR001998. Xylose_isomerase.
[Graphical view]
PfamPF01261. AP_endonuc_2. 1 hit.
[Graphical view]
PRINTSPR00688. XYLOSISMRASE.
SUPFAMSSF51658. SSF51658. 1 hit.
TIGRFAMsTIGR02630. xylose_isom_A. 1 hit.
PROSITEPS51415. XYLOSE_ISOMERASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameR9U359_BACLI
AccessionPrimary (citable) accession number: R9U359
Entry history
Integrated into UniProtKB/TrEMBL: September 18, 2013
Last sequence update: September 18, 2013
Last modified: June 11, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)