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Protein
Submitted name:

Uncharacterized protein

Gene

C815_00461

Organism
Firmicutes bacterium M10-2
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi25 – 46H-T-H motifPROSITE-ProRule annotationAdd BLAST22
DNA bindingi73 – 96H-T-H motifPROSITE-ProRule annotationAdd BLAST24

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation
Biological processTranscription, Transcription regulationPROSITE-ProRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:C815_00461Imported
OrganismiFirmicutes bacterium M10-2Imported
Taxonomic identifieri1235796 [NCBI]
Taxonomic lineageiBacteriaFirmicutes
Proteomesi
  • UP000014154 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini8 – 106HTH araC/xylS-typeInterPro annotationAdd BLAST99

Phylogenomic databases

OrthoDBiPOG091H035N.

Family and domain databases

Gene3Di3.20.80.10. 1 hit.
InterProiView protein in InterPro
IPR010499. AraC_E-bd.
IPR029441. Cass2.
IPR009057. Homeobox-like_sf.
IPR018060. HTH_AraC.
IPR011256. Reg_factor_effector_dom_sf.
IPR020449. Tscrpt_reg_HTH_AraC-type.
PfamiView protein in Pfam
PF14526. Cass2. 1 hit.
PF12833. HTH_18. 1 hit.
PRINTSiPR00032. HTHARAC.
SMARTiView protein in SMART
SM00871. AraC_E_bind. 1 hit.
SM00342. HTH_ARAC. 1 hit.
SUPFAMiSSF46689. SSF46689. 2 hits.
SSF55136. SSF55136. 1 hit.
PROSITEiView protein in PROSITE
PS01124. HTH_ARAC_FAMILY_2. 1 hit.

Sequencei

Sequence statusi: Complete.

R9LTX0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDWVTGIQHA INYVEEHLTE KIDYDKVAEE AACSSFYFQR IFGILCGMTL
60 70 80 90 100
GEYIRNRRLT LAGNELSATD EKVIDIALKY GYESPESFTR AFIKFHGVTP
110 120 130 140 150
SQAKKDGSKL KYFSRLSVQI TLNGGSMMNY KIIEKKAFDI IEKAERHTVD
160 170 180 190 200
NSENKKSIPD FWTRSHNDGT IKKLLDATTD KTYIFGVCYG NLPENARTFD
210 220 230 240 250
YSIAAKCSEN TIVPEGFRKN TIPARTWAVF ECKGAMPDAI QEMWHKIVSE
260 270 280
FFPASDYQPT YEMDIEAYTE GNMSSPDYRS EIWIPVMKK
Length:289
Mass (Da):33,109
Last modified:July 24, 2013 - v1
Checksum:i376107B7F18D5F94
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ASTB01000013 Genomic DNA. Translation: EOS61761.1.
RefSeqiWP_016318542.1. NZ_KE159681.1.

Genome annotation databases

EnsemblBacteriaiEOS61761; EOS61761; C815_00461.
PATRICifig|1235796.3.peg.464.

Similar proteinsi

Entry informationi

Entry nameiR9LTX0_9FIRM
AccessioniPrimary (citable) accession number: R9LTX0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: November 22, 2017
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported