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Protein
Submitted name:

Sigma-70 family RNA polymerase sigma factor

Gene

C815_01179

Organism
Firmicutes bacterium M10-2
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.SAAS annotation

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Sigma-70 family RNA polymerase sigma factorImported
Gene namesi
ORF Names:C815_01179Imported
OrganismiFirmicutes bacterium M10-2Imported
Taxonomic identifieri1235796 [NCBI]
Taxonomic lineageiBacteriaFirmicutes
Proteomesi
  • UP000014154 Componenti: Unassembled WGS sequence

Family & Domainsi

Sequence similaritiesi

Belongs to the UPF0122 family.SAAS annotation

Phylogenomic databases

OrthoDBiPOG091H022R

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR013324 RNA_pol_sigma_r3/r4-like
IPR007394 UPF0122
IPR036388 WH-like_DNA-bd_sf
PANTHERiPTHR40083 PTHR40083, 1 hit
PfamiView protein in Pfam
PF04297 UPF0122, 1 hit
SUPFAMiSSF88659 SSF88659, 1 hit

Sequencei

Sequence statusi: Complete.

R9LPM0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNNILANELI DTYGSLLTLR QQEIMDLYMK EDLSYSEIAQ ELNISRTAVM
60 70 80 90 100
DAVHKGLQLL EKYEKNIKFL QFKKEIYSII ETSTTLEECK RSLNDLLNTI

TQEE
Length:104
Mass (Da):12,166
Last modified:July 24, 2013 - v1
Checksum:iDA09F143E6504C0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ASTB01000025 Genomic DNA Translation: EOS60720.1
RefSeqiWP_016319245.1, NZ_KE159692.1

Genome annotation databases

EnsemblBacteriaiEOS60720; EOS60720; C815_01179

Similar proteinsi

Entry informationi

Entry nameiR9LPM0_9FIRM
AccessioniPrimary (citable) accession number: R9LPM0
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: April 25, 2018
This is version 28 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health