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Protein
Submitted name:

Two pore calcium channel protein 1

Gene

A306_13642

Organism
Columba livia (Rock dove)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Two pore calcium channel protein 1Imported
Gene namesi
ORF Names:A306_13642Imported
OrganismiColumba livia (Rock dove)Imported
Taxonomic identifieri8932 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeColumbiformesColumbidaeColumba
Proteomesi
  • UP000053872 Componenti: Unassembled WGS sequence

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei96 – 114HelicalSequence analysisAdd BLAST19
Transmembranei121 – 142HelicalSequence analysisAdd BLAST22
Transmembranei162 – 181HelicalSequence analysisAdd BLAST20
Transmembranei218 – 243HelicalSequence analysisAdd BLAST26
Transmembranei287 – 309HelicalSequence analysisAdd BLAST23
Transmembranei434 – 454HelicalSequence analysisAdd BLAST21
Transmembranei466 – 484HelicalSequence analysisAdd BLAST19
Transmembranei496 – 515HelicalSequence analysisAdd BLAST20
Transmembranei559 – 583HelicalSequence analysisAdd BLAST25
Transmembranei655 – 680HelicalSequence analysisAdd BLAST26

Keywords - Cellular componenti

Membrane

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini106 – 319Ion_transInterPro annotationAdd BLAST214
Domaini430 – 679Ion_transInterPro annotationAdd BLAST250

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiView protein in InterPro
IPR005821. Ion_trans_dom.
IPR028801. TPC1.
PANTHERiPTHR10037:SF231. PTHR10037:SF231. 1 hit.
PfamiView protein in Pfam
PF00520. Ion_trans. 2 hits.

Sequencei

Sequence statusi: Complete.

R7VT95-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDDDVPLILT LDDSGSGASA PLDDLDREEL PNENGGSYDV INDASSPAAG
60 70 80 90 100
DGCAQQSSAR HNWEMNYQEA AIYLQFFTHP KNAKALAAYL FAHNHLFYLM
110 120 130 140 150
ELSTALLLLL LSLCEAPAVP MLRLGIFVHA TLELFALIVV VFELSMKMRW
160 170 180 190 200
LGFQTFIRHK RTMVKTCVLF VQFIEAIVVL VRQTSHVRIT RALRCIFLVD
210 220 230 240 250
CRYCGAVRRN LRQIFQSLPP FIDILLLLLF FMVIFAILGF YLFSPNHSDP
260 270 280 290 300
YFNTLENSLV NLFVLLTTSN FPDVMMPSYA RNPWSCVFFI VYLSIELYFI
310 320 330 340 350
MNLLLAVVFD TFNDIEKRKF KSLLLHKRTA IQHAYRLLIT KQRPSGISFK
360 370 380 390 400
HFEGLLRFYK PRMCARERYL TFKALNQSHT PLLSLKDFYN FYEVVGLKWK
410 420 430 440 450
AKRNREHWFD DLPRTAFLIF KGINILVKSR VFQYTMYTVV AVNGIWILVE
460 470 480 490 500
TFMLQGGNFF SRNVPWSYIV FLTIYGMELL LKTTGLGPVE YLSSGWNLFD
510 520 530 540 550
FAVTLFAFLG LMALAFNMEP FYFIVVLRPL QLLRLFKLKK RYRNVLDTMF
560 570 580 590 600
ELFPRMASLG LTLLIFYYCF AIVGMEFFAG VVYPNCCNTS TVADSYRWVN
610 620 630 640 650
HTVGNKTVVE EGYYYLNNFD NILNSFVTLF ELTVVNDWYI IMEGVTSQTT
660 670 680 690 700
HWSRLYFMIF YIVTMVVMTI IVAFILDAFV FRMNYTRKNQ DSEEDNGIVL
710 720 730 740 750
EKEIFKEEVV GIIELYKRSS AATETAELQK IVLQMDKYGQ MSTLFLGRRS
760 770 780 790 800
RTKSDLSMKM YEEEIQEWYE EHSRKEESQT PLQEPASAST SSLKPLSLRQ

RSQTVI
Length:806
Mass (Da):93,686
Last modified:July 24, 2013 - v1
Checksum:i91DD173DF1E6FFE7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB375340 Genomic DNA. Translation: EMC78928.1.

Similar proteinsi

Entry informationi

Entry nameiR7VT95_COLLI
AccessioniPrimary (citable) accession number: R7VT95
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: October 25, 2017
This is version 22 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported