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Protein

50S ribosomal protein L13

Gene

rplM

Organism
Firmicutes bacterium CAG:555
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.UniRule annotationSAAS annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal proteinUniRule annotationSAAS annotationImported

Names & Taxonomyi

Protein namesi
Recommended name:
50S ribosomal protein L13UniRule annotationSAAS annotation
Gene namesi
Name:rplMUniRule annotation
ORF Names:BN705_00797Imported
OrganismiFirmicutes bacterium CAG:555Imported
Taxonomic identifieri1263030 [NCBI]
Taxonomic lineageiBacteriaFirmicutesenvironmental samples
Proteomesi
  • UP000018402 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Interactioni

Subunit structurei

Part of the 50S ribosomal subunit.UniRule annotationSAAS annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the universal ribosomal protein uL13 family.UniRule annotationSAAS annotation

Family and domain databases

CDDicd00392. Ribosomal_L13. 1 hit.
Gene3Di3.90.1180.10. 1 hit.
HAMAPiMF_01366. Ribosomal_L13. 1 hit.
InterProiView protein in InterPro
IPR005822. Ribosomal_L13.
IPR005823. Ribosomal_L13_bac-type.
IPR036899. Ribosomal_L13_sf.
PANTHERiPTHR11545. PTHR11545. 1 hit.
PfamiView protein in Pfam
PF00572. Ribosomal_L13. 1 hit.
PIRSFiPIRSF002181. Ribosomal_L13. 1 hit.
SUPFAMiSSF52161. SSF52161. 1 hit.
TIGRFAMsiTIGR01066. rplM_bact. 1 hit.

Sequencei

Sequence statusi: Complete.

R5D6W4-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSTTMLTKET VERKWYILDA AGKPLGKTAA AAADLLRGKL KTDYTPHVDC
60 70 80 90 100
GDYVIIINAK DAVLTGKKLE QKYYRTHSGW VGGLKETQYK HLMEKRPELA
110 120 130 140
MRIAVRGMLQ KNTIAQWQLK RLRVFAGPEH DHAAQKPEVW DR
Length:142
Mass (Da):16,206
Last modified:July 24, 2013 - v1
Checksum:iD33E6CCE4289EA80
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CAWW010000069 Genomic DNA. Translation: CCX71621.1.

Similar proteinsi

Entry informationi

Entry nameiR5D6W4_9FIRM
AccessioniPrimary (citable) accession number: R5D6W4
Entry historyiIntegrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: October 25, 2017
This is version 24 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

Keywords - Technical termi

Complete proteome, Reference proteomeImported