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Protein
Submitted name:

Cytoplasmic alpha-amylase

Gene

BSA_7980

Organism
Streptococcus agalactiae 09mas018883
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei234 – 2341NucleophileUniRule annotation
Active sitei264 – 2641Proton donorUniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseImported, Hydrolase

Names & Taxonomyi

Protein namesi
Submitted name:
Cytoplasmic alpha-amylaseImported (EC:3.2.1.1Imported)
Gene namesi
ORF Names:BSA_7980Imported
OrganismiStreptococcus agalactiae 09mas018883Imported
Taxonomic identifieri1309806 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus
ProteomesiUP000014931: Chromosome

Structurei

3D structure databases

ProteinModelPortaliR4ZLD9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

R4ZLD9-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MTNELIMQAF EWYLPSDGNH WKKLEDSISD LKKLGVSKIW LPPAFKGTSS
60 70 80 90 100
DDVGYGVYDL FDLGEFDQNG TIRTKYGRKE EYLKLIKSLK ANGIKPFADI
110 120 130 140 150
VLNHKANGDH KEKFQVIKVN PENRQEALSE PYEIEGWTGF DFPGRQGEYN
160 170 180 190 200
DFKWHWYHFT GLDYDAKNNE TDIFMIVGDN KGWADDDLID DENGNFDYLM
210 220 230 240 250
YNDIDFKHPE VIKNLQDWAK WFIETTGIEG FRLDAVKHID SYFIQTFIND
260 270 280 290 300
IRTKIKPDLE VFGEYWKSDQ TSMKDYLEAT QFQFSLVDVT LHMNFFDASH
310 320 330 340 350
QNRDFDMRTI FDDSLVIDNP EYAVTFVENH DTQSGQALES RVEDWFKPLA
360 370 380 390 400
YGLILLRQQG TPCLFYGDYY GIQGEFGQPS FKEVIDKMAE LRQNYVFGKQ
410 420 430 440 450
VDYFTHSNCI GWTCLGDEEY NSCLAVVLTN GDQGWKHMEV GEIYAGKTFV
460 470 480
DYLGNCEQEV VIGDDGWGDF LVESASISAW VPKIEEAN
Length:488
Mass (Da):56,553
Last modified:July 24, 2013 - v1
Checksum:i8E49BA7D3FCD4506
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF952104 Genomic DNA. Translation: CCW37570.1.
RefSeqiYP_008084450.1. NC_021485.1.

Genome annotation databases

EnsemblBacteriaiCCW37570; CCW37570; BSA_7980.
GeneIDi16158977.
KEGGisagm:BSA_7980.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HF952104 Genomic DNA. Translation: CCW37570.1.
RefSeqiYP_008084450.1. NC_021485.1.

3D structure databases

ProteinModelPortaliR4ZLD9.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiCCW37570; CCW37570; BSA_7980.
GeneIDi16158977.
KEGGisagm:BSA_7980.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR013776. A-amylase_thermo.
IPR015237. Alpha-amylase_C_pro.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF09154. DUF1939. 1 hit.
[Graphical view]
PIRSFiPIRSF001021. Alph-amls_thrmst. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Manzoor S.
    Submitted (MAR-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 09mas018883Imported.
  2. "Genome Sequence of Streptococcus agalactiae strain 09mas018883 isolated from a Swedish Cow."
    Zubair S., de Villiers E.P., Fuxelius H.H., Andersson G., Johansson K.E., Bishop R.P., Bongcam-Rudloff E.
    Genome Announc. 1:e00456-e00413(2014)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 09mas018883Imported.

Entry informationi

Entry nameiR4ZLD9_STRAG
AccessioniPrimary (citable) accession number: R4ZLD9
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: February 4, 2015
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.