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R4VUH8 (R4VUH8_AERHY) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:malS EMBL AGM43073.1
ORF Names:AHML_06445 EMBL AGM43073.1
OrganismAeromonas hydrophila ML09-119 [Complete proteome] EMBL AGM43073.1
Taxonomic identifier1288394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Protein attributes

Sequence length702 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
R4VUH8 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: E7AE49C942D811B5

FASTA70277,725
        10         20         30         40         50         60 
MRRTPSVSSL WLALLACPLF LHQAMAAEVR LYVDDQPVGA PLTLDKGAVQ MTHPLTKGSH 

        70         80         90        100        110        120 
QIRISDAGNS CGTSFGPSEA KPLPFGTAQP MEKCSKGQHF NLRVMLAGDY QFTFNPDTPS 

       130        140        150        160        170        180 
LKVLRATKKS EFKRQPPAEP CISWDGGPVT VSLKGVWPDG TQLRDAYSGQ QVVVKGDKLT 

       190        200        210        220        230        240 
LTPSKESGGL LLLEPVKAAT AAPFSWDQAS VYFLLTDRFN NGDSANDHSF GRQQDGQDEV 

       250        260        270        280        290        300 
ATWHGGDFKG LTAKLDYIKQ LGINAIWITP MVEQVHGFIG GGEQGNFPFY AYHGYWALDF 

       310        320        330        340        350        360 
TKIDPNYGDE ESLKTLVDEA HKRGMRIILD VVMNHAGYAT LADLQDLGLT DLTQNTGKLP 

       370        380        390        400        410        420 
ARWNQWRPSG GLNWHGYNQF IDYQSPKWDQ WWSGDWVRAG LPGYPQPGTD DVTGSVAGLP 

       430        440        450        460        470        480 
DFLTESTKPV GLPPLLAAKQ DTRAKALPNA TVSDYLIAWH TDWVRRFGID GFRADTVKHL 

       490        500        510        520        530        540 
EPEVWARLKQ AGTAALKEWK AANPTKKLDD LPFYMVGEVW DHGVAKDFWY QNGFDSLINF 

       550        560        570        580        590        600 
DYQREFALPQ AQCLASAEPT YAGYASRINQ DPGFNVLSYI SSHDTKLFFG DYQDVPLQRR 

       610        620        630        640        650        660 
VASSFMLLPG GIQIYYGDES GRGLAKDGGV FDQALRSDMN WQELAGGEKA ELVKHWQRLG 

       670        680        690        700 
QFRAAHPAVA AGSHKKLADS PYAFVREKGD DKVVVVFAGR QP 

« Hide

References

[1]"Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119."
Tekedar H.C., Waldbieser G.C., Karsi A., Liles M.R., Griffin M.J., Vamenta S., Sonstegard T., Hossain M., Schroeder S.G., Khoo L., Lawrence M.L.
Genome Announc. 1:e00755-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ML09-119 EMBL AGM43073.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005966 Genomic DNA. Translation: AGM43073.1.
RefSeqYP_008042420.1. NC_021290.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGM43073; AGM43073; AHML_06445.
GeneID16196448.
KEGGahy:AHML_06445.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR4VUH8_AERHY
AccessionPrimary (citable) accession number: R4VUH8
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: January 22, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)