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R4VUH8

- R4VUH8_AERHY

UniProt

R4VUH8 - R4VUH8_AERHY

Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Aeromonas hydrophila ML09-119
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (24 Jul 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. alpha-amylase activity Source: InterPro
    2. calcium ion binding Source: InterPro

    GO - Biological processi

    1. alpha-glucan catabolic process Source: InterPro
    2. cellular oligosaccharide catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Alpha-amylaseImported
    Gene namesi
    Name:malSImported
    ORF Names:AHML_06445Imported
    OrganismiAeromonas hydrophila ML09-119Imported
    Taxonomic identifieri1288394 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
    ProteomesiUP000014069: Chromosome

    Subcellular locationi

    GO - Cellular componenti

    1. periplasmic space Source: InterPro

    Family & Domainsi

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di3.20.20.80. 1 hit.
    InterProiIPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    [Graphical view]
    PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTiSM00642. Aamy. 1 hit.
    [Graphical view]
    SUPFAMiSSF51445. SSF51445. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    R4VUH8-1 [UniParc]FASTAAdd to Basket

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    MRRTPSVSSL WLALLACPLF LHQAMAAEVR LYVDDQPVGA PLTLDKGAVQ    50
    MTHPLTKGSH QIRISDAGNS CGTSFGPSEA KPLPFGTAQP MEKCSKGQHF 100
    NLRVMLAGDY QFTFNPDTPS LKVLRATKKS EFKRQPPAEP CISWDGGPVT 150
    VSLKGVWPDG TQLRDAYSGQ QVVVKGDKLT LTPSKESGGL LLLEPVKAAT 200
    AAPFSWDQAS VYFLLTDRFN NGDSANDHSF GRQQDGQDEV ATWHGGDFKG 250
    LTAKLDYIKQ LGINAIWITP MVEQVHGFIG GGEQGNFPFY AYHGYWALDF 300
    TKIDPNYGDE ESLKTLVDEA HKRGMRIILD VVMNHAGYAT LADLQDLGLT 350
    DLTQNTGKLP ARWNQWRPSG GLNWHGYNQF IDYQSPKWDQ WWSGDWVRAG 400
    LPGYPQPGTD DVTGSVAGLP DFLTESTKPV GLPPLLAAKQ DTRAKALPNA 450
    TVSDYLIAWH TDWVRRFGID GFRADTVKHL EPEVWARLKQ AGTAALKEWK 500
    AANPTKKLDD LPFYMVGEVW DHGVAKDFWY QNGFDSLINF DYQREFALPQ 550
    AQCLASAEPT YAGYASRINQ DPGFNVLSYI SSHDTKLFFG DYQDVPLQRR 600
    VASSFMLLPG GIQIYYGDES GRGLAKDGGV FDQALRSDMN WQELAGGEKA 650
    ELVKHWQRLG QFRAAHPAVA AGSHKKLADS PYAFVREKGD DKVVVVFAGR 700
    QP 702
    Length:702
    Mass (Da):77,725
    Last modified:July 24, 2013 - v1
    Checksum:iE7AE49C942D811B5
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005966 Genomic DNA. Translation: AGM43073.1.
    RefSeqiWP_016349900.1. NC_021290.1.
    YP_008042420.1. NC_021290.1.

    Genome annotation databases

    EnsemblBacteriaiAGM43073; AGM43073; AHML_06445.
    GeneIDi16196448.
    KEGGiahy:AHML_06445.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005966 Genomic DNA. Translation: AGM43073.1 .
    RefSeqi WP_016349900.1. NC_021290.1.
    YP_008042420.1. NC_021290.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGM43073 ; AGM43073 ; AHML_06445 .
    GeneIDi 16196448.
    KEGGi ahy:AHML_06445.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 3.20.20.80. 1 hit.
    InterProi IPR014635. A_amylase_MalS.
    IPR015902. Glyco_hydro_13.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
    SMARTi SM00642. Aamy. 1 hit.
    [Graphical view ]
    SUPFAMi SSF51445. SSF51445. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119."
      Tekedar H.C., Waldbieser G.C., Karsi A., Liles M.R., Griffin M.J., Vamenta S., Sonstegard T., Hossain M., Schroeder S.G., Khoo L., Lawrence M.L.
      Genome Announc. 1:e00755-13(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: ML09-119Imported.

    Entry informationi

    Entry nameiR4VUH8_AERHY
    AccessioniPrimary (citable) accession number: R4VUH8
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2013
    Last sequence update: July 24, 2013
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3