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Protein
Submitted name:

Alpha-amylase

Gene

malS

Organism
Aeromonas hydrophila ML09-119
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:AHML_06445Imported
OrganismiAeromonas hydrophila ML09-119Imported
Taxonomic identifieri1288394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000014069: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

R4VUH8-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRRTPSVSSL WLALLACPLF LHQAMAAEVR LYVDDQPVGA PLTLDKGAVQ
60 70 80 90 100
MTHPLTKGSH QIRISDAGNS CGTSFGPSEA KPLPFGTAQP MEKCSKGQHF
110 120 130 140 150
NLRVMLAGDY QFTFNPDTPS LKVLRATKKS EFKRQPPAEP CISWDGGPVT
160 170 180 190 200
VSLKGVWPDG TQLRDAYSGQ QVVVKGDKLT LTPSKESGGL LLLEPVKAAT
210 220 230 240 250
AAPFSWDQAS VYFLLTDRFN NGDSANDHSF GRQQDGQDEV ATWHGGDFKG
260 270 280 290 300
LTAKLDYIKQ LGINAIWITP MVEQVHGFIG GGEQGNFPFY AYHGYWALDF
310 320 330 340 350
TKIDPNYGDE ESLKTLVDEA HKRGMRIILD VVMNHAGYAT LADLQDLGLT
360 370 380 390 400
DLTQNTGKLP ARWNQWRPSG GLNWHGYNQF IDYQSPKWDQ WWSGDWVRAG
410 420 430 440 450
LPGYPQPGTD DVTGSVAGLP DFLTESTKPV GLPPLLAAKQ DTRAKALPNA
460 470 480 490 500
TVSDYLIAWH TDWVRRFGID GFRADTVKHL EPEVWARLKQ AGTAALKEWK
510 520 530 540 550
AANPTKKLDD LPFYMVGEVW DHGVAKDFWY QNGFDSLINF DYQREFALPQ
560 570 580 590 600
AQCLASAEPT YAGYASRINQ DPGFNVLSYI SSHDTKLFFG DYQDVPLQRR
610 620 630 640 650
VASSFMLLPG GIQIYYGDES GRGLAKDGGV FDQALRSDMN WQELAGGEKA
660 670 680 690 700
ELVKHWQRLG QFRAAHPAVA AGSHKKLADS PYAFVREKGD DKVVVVFAGR

QP
Length:702
Mass (Da):77,725
Last modified:July 24, 2013 - v1
Checksum:iE7AE49C942D811B5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005966 Genomic DNA. Translation: AGM43073.1.
RefSeqiWP_016349900.1. NC_021290.1.
YP_008042420.1. NC_021290.1.

Genome annotation databases

EnsemblBacteriaiAGM43073; AGM43073; AHML_06445.
GeneIDi16196448.
KEGGiahy:AHML_06445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP005966 Genomic DNA. Translation: AGM43073.1.
RefSeqiWP_016349900.1. NC_021290.1.
YP_008042420.1. NC_021290.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAGM43073; AGM43073; AHML_06445.
GeneIDi16196448.
KEGGiahy:AHML_06445.

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119."
    Tekedar H.C., Waldbieser G.C., Karsi A., Liles M.R., Griffin M.J., Vamenta S., Sonstegard T., Hossain M., Schroeder S.G., Khoo L., Lawrence M.L.
    Genome Announc. 1:e00755-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ML09-119Imported.

Entry informationi

Entry nameiR4VUH8_AERHY
AccessioniPrimary (citable) accession number: R4VUH8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: January 7, 2015
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.