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R4VUH8

- R4VUH8_AERHY

UniProt

R4VUH8 - R4VUH8_AERHY

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Protein
Submitted name: Alpha-amylase
Gene
malS, AHML_06445
Organism
Aeromonas hydrophila ML09-119
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. alpha-amylase activity Source: InterPro
  2. calcium ion binding Source: InterPro

GO - Biological processi

  1. alpha-glucan catabolic process Source: InterPro
  2. cellular oligosaccharide catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-amylaseImported
Gene namesi
Name:malSImported
ORF Names:AHML_06445Imported
OrganismiAeromonas hydrophila ML09-119Imported
Taxonomic identifieri1288394 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas
ProteomesiUP000014069: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. periplasmic space Source: InterPro
Complete GO annotation...

Family & Domainsi

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFiPIRSF036917. Alph_amls_MalS. 1 hit.
SMARTiSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMiSSF51445. SSF51445. 1 hit.

Sequencei

Sequence statusi: Complete.

R4VUH8-1 [UniParc]FASTAAdd to Basket

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MRRTPSVSSL WLALLACPLF LHQAMAAEVR LYVDDQPVGA PLTLDKGAVQ    50
MTHPLTKGSH QIRISDAGNS CGTSFGPSEA KPLPFGTAQP MEKCSKGQHF 100
NLRVMLAGDY QFTFNPDTPS LKVLRATKKS EFKRQPPAEP CISWDGGPVT 150
VSLKGVWPDG TQLRDAYSGQ QVVVKGDKLT LTPSKESGGL LLLEPVKAAT 200
AAPFSWDQAS VYFLLTDRFN NGDSANDHSF GRQQDGQDEV ATWHGGDFKG 250
LTAKLDYIKQ LGINAIWITP MVEQVHGFIG GGEQGNFPFY AYHGYWALDF 300
TKIDPNYGDE ESLKTLVDEA HKRGMRIILD VVMNHAGYAT LADLQDLGLT 350
DLTQNTGKLP ARWNQWRPSG GLNWHGYNQF IDYQSPKWDQ WWSGDWVRAG 400
LPGYPQPGTD DVTGSVAGLP DFLTESTKPV GLPPLLAAKQ DTRAKALPNA 450
TVSDYLIAWH TDWVRRFGID GFRADTVKHL EPEVWARLKQ AGTAALKEWK 500
AANPTKKLDD LPFYMVGEVW DHGVAKDFWY QNGFDSLINF DYQREFALPQ 550
AQCLASAEPT YAGYASRINQ DPGFNVLSYI SSHDTKLFFG DYQDVPLQRR 600
VASSFMLLPG GIQIYYGDES GRGLAKDGGV FDQALRSDMN WQELAGGEKA 650
ELVKHWQRLG QFRAAHPAVA AGSHKKLADS PYAFVREKGD DKVVVVFAGR 700
QP 702
Length:702
Mass (Da):77,725
Last modified:July 24, 2013 - v1
Checksum:iE7AE49C942D811B5
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005966 Genomic DNA. Translation: AGM43073.1.
RefSeqiWP_016349900.1. NC_021290.1.
YP_008042420.1. NC_021290.1.

Genome annotation databases

EnsemblBacteriaiAGM43073; AGM43073; AHML_06445.
GeneIDi16196448.
KEGGiahy:AHML_06445.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005966 Genomic DNA. Translation: AGM43073.1 .
RefSeqi WP_016349900.1. NC_021290.1.
YP_008042420.1. NC_021290.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGM43073 ; AGM43073 ; AHML_06445 .
GeneIDi 16196448.
KEGGi ahy:AHML_06445.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 3.20.20.80. 1 hit.
InterProi IPR014635. A_amylase_MalS.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
[Graphical view ]
PIRSFi PIRSF036917. Alph_amls_MalS. 1 hit.
SMARTi SM00642. Aamy. 1 hit.
[Graphical view ]
SUPFAMi SSF51445. SSF51445. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119."
    Tekedar H.C., Waldbieser G.C., Karsi A., Liles M.R., Griffin M.J., Vamenta S., Sonstegard T., Hossain M., Schroeder S.G., Khoo L., Lawrence M.L.
    Genome Announc. 1:e00755-13(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: ML09-119Imported.

Entry informationi

Entry nameiR4VUH8_AERHY
AccessioniPrimary (citable) accession number: R4VUH8
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: September 3, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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