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R4VR65 (R4VR65_STRIN) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:K710_1941 EMBL AGM99689.1
OrganismStreptococcus iniae SF1 [Complete proteome] EMBL AGM99689.1
Taxonomic identifier1318633 [NCBI]
Taxonomic lineageBacteriaFirmicutesBacilliLactobacillalesStreptococcaceaeStreptococcus

Protein attributes

Sequence length902 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Cellular componentSecreted SAAS SAAS005877
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Cellular_componentextracellular region

Inferred from electronic annotation. Source: UniProtKB-KW

membrane

Inferred from electronic annotation. Source: InterPro

   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
R4VR65 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: C38DC0545BC0A57A

FASTA902101,384
        10         20         30         40         50         60 
MNKNSKKLFE KRQRFSIRRL SIGVGSVLIG ICLFGTPLVS AEELRPTQPG LVTSSVTDLS 

        70         80         90        100        110        120 
PASHQKESDI TQVNDLKVSD KAIVETEPTL SVTDNTIRLD LSNDDKKRKE ILSEGQFASD 

       130        140        150        160        170        180 
QVQQANPIAE AYKENEVFKI DNQVLQKNSK IDLSEHLDAL KKLDSATIYA EIKTPEDMDD 

       190        200        210        220        230        240 
FMTWFSVSTS ANENERFYLY ITKEGVVGVE GADNANKPFY KSFTSASQRV KPSEWNALAF 

       250        260        270        280        290        300 
VINQEAQKVQ IYVNGILSQE DSTSTQFIKD LANPEFAQIG QTQRGRSNKW GFSHFDIKNF 

       310        320        330        340        350        360 
TVYNRALSET EVGDRSQLFI RGKNHVTLAE GAELSDKQDV YQSGYIKRKN QDGVYAYRIP 

       370        380        390        400        410        420 
ALLKTDKGTL IAGADERFNH SSDWGNIGMV IRRSEDNGKT WSDRNTLVNL RDNPKAAVAE 

       430        440        450        460        470        480 
ENSPVNIDMV LVQDPTSKRI FSIYDMFPEG RGIFGMSKKQ EVEYTKHGDK TYMNLYREDG 

       490        500        510        520        530        540 
KGDGVYTIRE GGYVYTPQGA KTNYRVITAS DKKDRSDLGD LYQDQDLIGN VYFTSHKTSP 

       550        560        570        580        590        600 
FRIAKSNYLW LSYSDDDGKT WSSPRDITSM VRSPEMKFLG VGPGTGIVLK YGEHKGRIIV 

       610        620        630        640        650        660 
PTYSTNWKSH LDGSQSSRVI YSDDHGLTWQ MGAAVNDNRV TKSGQKIHSA TMAIEKEQNT 

       670        680        690        700        710        720 
ESVAVQLKNG DIKLFVRNKT GKLQVATSKD GGQTWQNDLD RYQAVNDVYV QLSAIALERD 

       730        740        750        760        770        780 
GKEYIVLANA NGPDRNNGYV RLAEVQADGS LKWLHHRLVQ KGAFAYNSLQ QIGKDDFALL 

       790        800        810        820        830        840 
YEHKEAGQND FTLSLKTFNW KFLTEDPVYD TVTVDGVEQL SDNQVAVHFT HAVFATNQPD 

       850        860        870        880        890        900 
LTLANDQKMT FLFQKDAKTV IYHLDPKDFG QKITTASLAD ISNHFGLKVS LLAQLPHHKK 


GM 

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References

[1]Zhang B., Sun L.
Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SF1 EMBL AGM99689.1.
[2]"Streptococcus iniae SF1: Complete Genome Sequence, Proteomic Profile, and Immunoprotective Antigens."
Zhang B.C., Zhang J., Sun L.
PLoS ONE 9:E91324-E91324(2014) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: SF1 EMBL AGM99689.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005941 Genomic DNA. Translation: AGM99689.1.
RefSeqYP_008057626.1. NC_021314.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGM99689; AGM99689; K710_1941.
GeneID16209423.
KEGGsik:K710_1941.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR004124. Glyco_hydro_33_N.
IPR005877. Gpos_YSIRK.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF02973. Sialidase. 1 hit.
PF04650. YSIRK_signal. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
TIGRFAMsTIGR01168. YSIRK_signal. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR4VR65_STRIN
AccessionPrimary (citable) accession number: R4VR65
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: May 14, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)