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R4VB69 (R4VB69_AERHY) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 8. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:AHML_07175 EMBL AGM43219.1
OrganismAeromonas hydrophila ML09-119 [Complete proteome] EMBL AGM43219.1
Taxonomic identifier1288394 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAeromonadalesAeromonadaceaeAeromonas

Protein attributes

Sequence length522 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

sialic acid binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
R4VB69 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: 2ED9B5EEEA14910D

FASTA52257,073
        10         20         30         40         50         60 
MVAFAEGRAS SHDPGSGYPT SIKSRRSTDN GITWSDYYVI HEGVNEAYSD PRPFIDKING 

        70         80         90        100        110        120 
RMFVFYTKWD NRCAQNGNCV PFDDPQHKLL YRSSDDNGKT WSSPVDILAK VRDTNWMANG 

       130        140        150        160        170        180 
ISGLATWSLT PSQTQIEQAR NMGWSLNWVS RVADGRCNVQ YYGDGNKRFL ADLQVNADKS 

       190        200        210        220        230        240 
VKAVLYTDTG TLEHPLALDV SGYHSYQIKG SGGTASFYVD GQLVASKWLG QTHASKTVTW 

       250        260        270        280        290        300 
GNGCSNTAGA IAYQSVDFRI GNSSQLAFNA NLMKRVNGTV VNTPTDQGWS QILTSSGKGG 

       310        320        330        340        350        360 
PGWKSINAGP GQGIQLSNGR LIFPAIVLDA FAQLSVVSIY SDDHGETWKA GTQTPTYAHE 

       370        380        390        400        410        420 
PSEADMVELN DGRLLLSARN DGVTGVGNFN RYQFISSDQG ISWKMILEDR NSINGSLFFK 

       430        440        450        460        470        480 
LNPVDIGLLN YDGNRLLMSG PQGNTAVSSD RNDLAIWSAT DDGTGSYNFT KRTQVRDGYS 

       490        500        510        520 
AYSDLVKLQS QGANGNEDIG VIYEASPSTE IRFMVLDINE VE 

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References

[1]"Complete Genome Sequence of a Channel Catfish Epidemic Isolate, Aeromonas hydrophila Strain ML09-119."
Tekedar H.C., Waldbieser G.C., Karsi A., Liles M.R., Griffin M.J., Vamenta S., Sonstegard T., Hossain M., Schroeder S.G., Khoo L., Lawrence M.L.
Genome Announc. 1:e00755-13(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: ML09-119 EMBL AGM43219.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005966 Genomic DNA. Translation: AGM43219.1.
RefSeqYP_008042566.1. NC_021290.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGM43219; AGM43219; AHML_07175.
GeneID16195504.
KEGGahy:AHML_07175.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 2 hits.
2.60.120.200. 1 hit.
InterProIPR008985. ConA-like_lec_gl_sf.
IPR013320. ConA-like_subgrp.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
IPR015344. VCNA_lectin-like_dom.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PfamPF09264. Sial-lect-inser. 1 hit.
[Graphical view]
SUPFAMSSF49899. SSF49899. 1 hit.
SSF50939. SSF50939. 2 hits.
ProtoNetSearch...

Entry information

Entry nameR4VB69_AERHY
AccessionPrimary (citable) accession number: R4VB69
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: May 14, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)