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R4TAG4 (R4TAG4_AMYOR) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 6. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length512 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Molecular_functionexo-alpha-sialidase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
R4TAG4 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: DEE303FF6B49E02C

FASTA51252,976
        10         20         30         40         50         60 
MPRHPETIQD GANPLKISRV AQGLFAALVA IAAVGAFPAT SFAATAAVGN TVVYKQKTEG 

        70         80         90        100        110        120 
YDCFRIPAIV KANNGELLAF AEGRNGGAGF CNDRGDIDLV VKRSADNGKT WSAPKIVIEG 

       130        140        150        160        170        180 
FGDTKGNPTP IVIPSTGRIV LLSVMECVKN PDCNRIPRVS ISDDHGKTWT APKVLTTQLG 

       190        200        210        220        230        240 
FATAPGWLAT GPSHGIVLTR GAHAGRIVAG MSYTIDGKNS GALVYSDDQG VTWKRGATDT 

       250        260        270        280        290        300 
PATTAGLNPQ EISVTELLDG RVYAAARNQA NNDDKCLSGG AKNRAYAISS DGGASFSTKF 

       310        320        330        340        350        360 
TFEEDLITPV VQASTARMTA TDKAGKYNRI LFAAPSVCDR RKELVVRSSF DEGANWQGNS 

       370        380        390        400        410        420 
AGTLVWSGDA AYSDMVQLSS GSVGVLYEAG PAGNANETIR FSTVTETTLG APVCGGGYGV 

       430        440        450        460        470        480 
IDSAPLGTAG TVYLSYNASN GQNCVSTMKS EAAGTATATS AYLEVSGSAR ITDSGSFSWF 

       490        500        510 
AGPVRTAAAG KCVKWGGSAG GIKYDSPSEH CG 

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References

[1]"ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: HCCB10007 EMBL AGM07852.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003410 Genomic DNA. Translation: AGM07852.1.
RefSeqYP_008014255.1. NC_021252.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGM07852; AGM07852; AORI_5269.
GeneID15623729.
KEGGaoi:AORI_5269.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01186.

Family and domain databases

Gene3D2.120.10.10. 1 hit.
InterProIPR026948. Sialidase/anhydrosialidase.
IPR026856. Sialidase_fam.
IPR011040. Sialidases.
[Graphical view]
PANTHERPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMSSF50939. SSF50939. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR4TAG4_AMYOR
AccessionPrimary (citable) accession number: R4TAG4
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: April 16, 2014
This is version 6 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)