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R4TAG4

- R4TAG4_AMYOR

UniProt

R4TAG4 - R4TAG4_AMYOR

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Protein
Submitted name:

Sialidase-1

Gene

AORI_5269

Organism
Amycolatopsis orientalis HCCB10007
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro

GO - Biological processi

  1. pathogenesis Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase-1Imported
Gene namesi
ORF Names:AORI_5269Imported
OrganismiAmycolatopsis orientalis HCCB10007Imported
Taxonomic identifieri1156913 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000013968: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

R4TAG4-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MPRHPETIQD GANPLKISRV AQGLFAALVA IAAVGAFPAT SFAATAAVGN
60 70 80 90 100
TVVYKQKTEG YDCFRIPAIV KANNGELLAF AEGRNGGAGF CNDRGDIDLV
110 120 130 140 150
VKRSADNGKT WSAPKIVIEG FGDTKGNPTP IVIPSTGRIV LLSVMECVKN
160 170 180 190 200
PDCNRIPRVS ISDDHGKTWT APKVLTTQLG FATAPGWLAT GPSHGIVLTR
210 220 230 240 250
GAHAGRIVAG MSYTIDGKNS GALVYSDDQG VTWKRGATDT PATTAGLNPQ
260 270 280 290 300
EISVTELLDG RVYAAARNQA NNDDKCLSGG AKNRAYAISS DGGASFSTKF
310 320 330 340 350
TFEEDLITPV VQASTARMTA TDKAGKYNRI LFAAPSVCDR RKELVVRSSF
360 370 380 390 400
DEGANWQGNS AGTLVWSGDA AYSDMVQLSS GSVGVLYEAG PAGNANETIR
410 420 430 440 450
FSTVTETTLG APVCGGGYGV IDSAPLGTAG TVYLSYNASN GQNCVSTMKS
460 470 480 490 500
EAAGTATATS AYLEVSGSAR ITDSGSFSWF AGPVRTAAAG KCVKWGGSAG
510
GIKYDSPSEH CG
Length:512
Mass (Da):52,976
Last modified:July 24, 2013 - v1
Checksum:iDEE303FF6B49E02C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003410 Genomic DNA. Translation: AGM07852.1.
RefSeqiWP_016335593.1. NC_021252.1.
YP_008014255.1. NC_021252.1.

Genome annotation databases

EnsemblBacteriaiAGM07852; AGM07852; AORI_5269.
GeneIDi15623729.
KEGGiaoi:AORI_5269.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003410 Genomic DNA. Translation: AGM07852.1 .
RefSeqi WP_016335593.1. NC_021252.1.
YP_008014255.1. NC_021252.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGM07852 ; AGM07852 ; AORI_5269 .
GeneIDi 15623729.
KEGGi aoi:AORI_5269.

Phylogenomic databases

KOi K01186.

Family and domain databases

Gene3Di 2.120.10.10. 1 hit.
InterProi IPR026856. Sialidase_fam.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMi SSF50939. SSF50939. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
    Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
    BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HCCB10007Imported.

Entry informationi

Entry nameiR4TAG4_AMYOR
AccessioniPrimary (citable) accession number: R4TAG4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: October 29, 2014
This is version 10 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3