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R4TAG4

- R4TAG4_AMYOR

UniProt

R4TAG4 - R4TAG4_AMYOR

Protein
Submitted name:

Sialidase-1

Gene

AORI_5269

Organism
Amycolatopsis orientalis HCCB10007
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 9 (01 Oct 2014)
      Sequence version 1 (24 Jul 2013)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. exo-alpha-sialidase activity Source: InterPro

    GO - Biological processi

    1. pathogenesis Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Sialidase-1Imported
    Gene namesi
    ORF Names:AORI_5269Imported
    OrganismiAmycolatopsis orientalis HCCB10007Imported
    Taxonomic identifieri1156913 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
    ProteomesiUP000013968: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01186.

    Family and domain databases

    Gene3Di2.120.10.10. 1 hit.
    InterProiIPR026856. Sialidase_fam.
    IPR008377. Sialidase_trypan.
    IPR011040. Sialidases.
    [Graphical view]
    PANTHERiPTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF5. PTHR10628:SF5. 1 hit.
    SUPFAMiSSF50939. SSF50939. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    R4TAG4-1 [UniParc]FASTAAdd to Basket

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    MPRHPETIQD GANPLKISRV AQGLFAALVA IAAVGAFPAT SFAATAAVGN    50
    TVVYKQKTEG YDCFRIPAIV KANNGELLAF AEGRNGGAGF CNDRGDIDLV 100
    VKRSADNGKT WSAPKIVIEG FGDTKGNPTP IVIPSTGRIV LLSVMECVKN 150
    PDCNRIPRVS ISDDHGKTWT APKVLTTQLG FATAPGWLAT GPSHGIVLTR 200
    GAHAGRIVAG MSYTIDGKNS GALVYSDDQG VTWKRGATDT PATTAGLNPQ 250
    EISVTELLDG RVYAAARNQA NNDDKCLSGG AKNRAYAISS DGGASFSTKF 300
    TFEEDLITPV VQASTARMTA TDKAGKYNRI LFAAPSVCDR RKELVVRSSF 350
    DEGANWQGNS AGTLVWSGDA AYSDMVQLSS GSVGVLYEAG PAGNANETIR 400
    FSTVTETTLG APVCGGGYGV IDSAPLGTAG TVYLSYNASN GQNCVSTMKS 450
    EAAGTATATS AYLEVSGSAR ITDSGSFSWF AGPVRTAAAG KCVKWGGSAG 500
    GIKYDSPSEH CG 512
    Length:512
    Mass (Da):52,976
    Last modified:July 24, 2013 - v1
    Checksum:iDEE303FF6B49E02C
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003410 Genomic DNA. Translation: AGM07852.1.
    RefSeqiYP_008014255.1. NC_021252.1.

    Genome annotation databases

    EnsemblBacteriaiAGM07852; AGM07852; AORI_5269.
    GeneIDi15623729.
    KEGGiaoi:AORI_5269.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003410 Genomic DNA. Translation: AGM07852.1 .
    RefSeqi YP_008014255.1. NC_021252.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGM07852 ; AGM07852 ; AORI_5269 .
    GeneIDi 15623729.
    KEGGi aoi:AORI_5269.

    Phylogenomic databases

    KOi K01186.

    Family and domain databases

    Gene3Di 2.120.10.10. 1 hit.
    InterProi IPR026856. Sialidase_fam.
    IPR008377. Sialidase_trypan.
    IPR011040. Sialidases.
    [Graphical view ]
    PANTHERi PTHR10628. PTHR10628. 1 hit.
    PTHR10628:SF5. PTHR10628:SF5. 1 hit.
    SUPFAMi SSF50939. SSF50939. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
      Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
      BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: HCCB10007Imported.

    Entry informationi

    Entry nameiR4TAG4_AMYOR
    AccessioniPrimary (citable) accession number: R4TAG4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2013
    Last sequence update: July 24, 2013
    Last modified: October 1, 2014
    This is version 9 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3