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R4TAG4

- R4TAG4_AMYOR

UniProt

R4TAG4 - R4TAG4_AMYOR

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Protein
Submitted name: Sialidase-1
Gene
AORI_5269
Organism
Amycolatopsis orientalis HCCB10007
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. exo-alpha-sialidase activity Source: InterPro

GO - Biological processi

  1. pathogenesis Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Sialidase-1Imported
Gene namesi
ORF Names:AORI_5269Imported
OrganismiAmycolatopsis orientalis HCCB10007Imported
Taxonomic identifieri1156913 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesPseudonocardineaePseudonocardiaceaeAmycolatopsis
ProteomesiUP000013968: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01186.

Family and domain databases

Gene3Di2.120.10.10. 1 hit.
InterProiIPR026856. Sialidase_fam.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view]
PANTHERiPTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMiSSF50939. SSF50939. 1 hit.

Sequencei

Sequence statusi: Complete.

R4TAG4-1 [UniParc]FASTAAdd to Basket

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MPRHPETIQD GANPLKISRV AQGLFAALVA IAAVGAFPAT SFAATAAVGN    50
TVVYKQKTEG YDCFRIPAIV KANNGELLAF AEGRNGGAGF CNDRGDIDLV 100
VKRSADNGKT WSAPKIVIEG FGDTKGNPTP IVIPSTGRIV LLSVMECVKN 150
PDCNRIPRVS ISDDHGKTWT APKVLTTQLG FATAPGWLAT GPSHGIVLTR 200
GAHAGRIVAG MSYTIDGKNS GALVYSDDQG VTWKRGATDT PATTAGLNPQ 250
EISVTELLDG RVYAAARNQA NNDDKCLSGG AKNRAYAISS DGGASFSTKF 300
TFEEDLITPV VQASTARMTA TDKAGKYNRI LFAAPSVCDR RKELVVRSSF 350
DEGANWQGNS AGTLVWSGDA AYSDMVQLSS GSVGVLYEAG PAGNANETIR 400
FSTVTETTLG APVCGGGYGV IDSAPLGTAG TVYLSYNASN GQNCVSTMKS 450
EAAGTATATS AYLEVSGSAR ITDSGSFSWF AGPVRTAAAG KCVKWGGSAG 500
GIKYDSPSEH CG 512
Length:512
Mass (Da):52,976
Last modified:July 24, 2013 - v1
Checksum:iDEE303FF6B49E02C
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003410 Genomic DNA. Translation: AGM07852.1.
RefSeqiYP_008014255.1. NC_021252.1.

Genome annotation databases

EnsemblBacteriaiAGM07852; AGM07852; AORI_5269.
GeneIDi15623729.
KEGGiaoi:AORI_5269.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003410 Genomic DNA. Translation: AGM07852.1 .
RefSeqi YP_008014255.1. NC_021252.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGM07852 ; AGM07852 ; AORI_5269 .
GeneIDi 15623729.
KEGGi aoi:AORI_5269.

Phylogenomic databases

KOi K01186.

Family and domain databases

Gene3Di 2.120.10.10. 1 hit.
InterProi IPR026856. Sialidase_fam.
IPR008377. Sialidase_trypan.
IPR011040. Sialidases.
[Graphical view ]
PANTHERi PTHR10628. PTHR10628. 1 hit.
PTHR10628:SF5. PTHR10628:SF5. 1 hit.
SUPFAMi SSF50939. SSF50939. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "ContigScape: a Cytoscape plugin facilitating microbial genome gap closing."
    Tang B., Wang Q., Yang M., Xie F., Zhu Y., Zhuo Y., Wang S., Gao H., Ding X., Zhang L., Zhao G., Zheng H.
    BMC Genomics 14:289-289(2013) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HCCB10007Imported.

Entry informationi

Entry nameiR4TAG4_AMYOR
AccessioniPrimary (citable) accession number: R4TAG4
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: September 3, 2014
This is version 8 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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