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R4RJK3 (R4RJK3_PSEPH) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length1115 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
R4RJK3 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: A9FD9D8B32D6DB39

FASTA1,115125,210
        10         20         30         40         50         60 
MAKKPRPTTF IKDPLWYKDA VIYQVHVKSY FDSNNDGIGD FPGLIAKLDY IKDLGVNTIW 

        70         80         90        100        110        120 
LLPFYPSPRR DDGYDIAEYR GVSPDYGTLA DARRFIAEAH KRELRVITEL VINHTSDQHP 

       130        140        150        160        170        180 
WFQRARKAKP GSAARNFYVW SDDDQKYDGT RIIFLDTEKS NWTWDPVAGQ YFWHRFYSHQ 

       190        200        210        220        230        240 
PDLNFDNPQV MKAVLSVMRY WLDMGIDGLR LDAIPYLIER DGTNNENLPE THQVLKQIRA 

       250        260        270        280        290        300 
EIDANYPDRM LLAEANQWPE DTQLYFGDVT GSDGDECHMA FHFPLMPRMY MALAQEDRFP 

       310        320        330        340        350        360 
ITDILRQTPE IPANCQWAIF LRNHDELTLE MVTDRERDYL WNYYAADRRA RINLGIRRRL 

       370        380        390        400        410        420 
APLMERDRRR IELLNSLLLS MPGTPTLYYG DEIGMGDNIY LGDRDGVRTP MQWSIDRNGG 

       430        440        450        460        470        480 
FSRADPASLV LPPIMDSLYG YPSVNVETQS GDPHSLLNWT RRMLAVRKQS KAFGRGTLKM 

       490        500        510        520        530        540 
LSPSNRRILA YTREYTGPDG KQEIILCVAN VSRSAQAAEL DLSAFAGMVP VEMLGGNAFP 

       550        560        570        580        590        600 
PIGQLNFLLT LAPYGFYWFV LAAENQMPSW HVEPAQSLPD FTTLVLKKRL EELLEAPSRT 

       610        620        630        640        650        660 
TLEQEVLPNW LPKRRWFAGK DSAIDQARIA YGVRFGDPQH PVLLSEIEVT SAGRSERYQL 

       670        680        690        700        710        720 
PFGLLAEEQI NSALPQQLAM ARVRRGRQVG LITDAFALDS FVRNVLLALQ GATCLDSEQG 

       730        740        750        760        770        780 
QIRFEATAQL AALGLGADAE VRYLSAEQSN SSVVVGGSLV LKLIRKVAGG IHPELEMGAF 

       790        800        810        820        830        840 
LTAAGFAHIS PLLGSVLRRD AQGEDHLLMI AQGYLNNQGD AWEWTQNNLE RAIRDELAEA 

       850        860        870        880        890        900 
MSEQEQHYNA LGELQDFAGL LGQRLGEMHL LLAAPSDNPD FAPEHATAKD AQAWNQQVAE 

       910        920        930        940        950        960 
QLERGLQLLQ QHQAELAAGE QKLLGKLLQH KALILGHIQQ LAKQLVGGVR IRVHGDLHLG 

       970        980        990       1000       1010       1020 
QVLVIKGDAY LIDFEGEPAR PLAERRGKHS PYKDVSGVLR SFDYAAAMAL EAPAVDGAQG 

      1030       1040       1050       1060       1070       1080 
AAAGRRKVVT RYLAEARHAF VQAYRLATAN LAHGWQDPAA ADAALALFSL EKAAYELAYE 

      1090       1100       1110 
AENRPAWLPV PLHGLVGLLR ELKPFSDIES GGEQS 

« Hide

References

[1]"Genome Sequence of Pseudomonas protegens CHA0."
Schuldes J., Thuermer A., Jousset A., Keel C., Maurhofer M., Scheu S., Daniel R.
Submitted (DEC-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: CHA0 EMBL AGL84689.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003190 Genomic DNA. Translation: AGL84689.1.
RefSeqYP_008000193.1. NC_021237.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGL84689; AGL84689; PFLCHA0_c29190.
GeneID15560835.
KEGGpprc:PFLCHA0_c29190.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR011009. Kinase-like_dom.
IPR012810. TreS/a-amylase_N.
IPR012811. TreS_maltokin_C_dom.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
SSF56112. SSF56112. 3 hits.
TIGRFAMsTIGR02457. TreS_Cterm. 1 hit.
TIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR4RJK3_PSEPH
AccessionPrimary (citable) accession number: R4RJK3
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: June 11, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)