Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

R4N443 (R4N443_MYCPC) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 4. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Protein attributes

Sequence length590 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
R4N443 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: D26899603A003AFF

FASTA59067,665
        10         20         30         40         50         60 
MNDAREAVEH HPEEGSHVQD GVVEHPEAED FDNAAALPTD PTWFKHAVFY EVLVRAFFDA 

        70         80         90        100        110        120 
NADGAGDLRG LLAQLDYLQW LGIDCIWLPP FYDSPLRDGG YDIRDFYKVL PEFGTVEDFV 

       130        140        150        160        170        180 
ALLNAAHERG IRVITDLVMN HTSESHPWFQ ESRHDPDGPY GDFYVWSDTS DRYADARIIF 

       190        200        210        220        230        240 
VDTEESNWTF DPVRRQFYWH RFFSHQPDLN YDNPAVQEAM IDVIRFWLGL GIDGFRLDAV 

       250        260        270        280        290        300 
PYLFEREGTN CENLPETHAF LKRVRKVVDD EFPGRVLLAE ANQWPADVVE YFGDPSTGGD 

       310        320        330        340        350        360 
ECHMAFHFPL MPRIFMAVRR ESRFPISEIL AQTPQIPEMA QWGIFLRNHD ELTLEMVTDE 

       370        380        390        400        410        420 
ERDYMYAEYA KDPRMKANVG IRRRLAPLLD NDRNQIELFT ALLLSLPGSP VLYYGDEIGM 

       430        440        450        460        470        480 
GDVIWLGDRD GVRTPMQWTP DRNAGFSKAN PGRLYLPPSQ DPVYGYQAVN VEAQRDTSTS 

       490        500        510        520        530        540 
LLNFTRTMLA VRRRHEAFAI GTFEELGGSN PSVLAFVRQV SNDGDTVLCV NNLSRFPQPI 

       550        560        570        580        590 
ELNLQHWSGC IPVELTGHVE FPRIGHLPYL LTLPGHGFYW FQLTACEEDT 

« Hide

References

[1]"Complete Genome Sequence of a Mycobacterium avium subspecies paratuberculosis Isolate from a Patient with Crohn's Disease."
Li L., Mwangi M., Cote R., Bannantine J.P., Raygoza Garay J.A., Sreevatsan S., Kapur V.
Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MAP4 EMBL AGL35214.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005928 Genomic DNA. Translation: AGL35214.1.
RefSeqYP_007970127.1. NC_021200.1.

3D structure databases

ProteinModelPortalR4N443.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGL35214; AGL35214; MAP4_0248.
GeneID15487280.
KEGGmao:MAP4_0248.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 3 hits.
InterProIPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR012810. TreS/a-amylase_N.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
TIGRFAMsTIGR02456. treS_nterm. 1 hit.
ProtoNetSearch...

Entry information

Entry nameR4N443_MYCPC
AccessionPrimary (citable) accession number: R4N443
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: January 22, 2014
This is version 4 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)