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R4LMQ9 (R4LMQ9_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length548 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Keywords
   Biological processCarbohydrate metabolism RuleBase RU361134
   Molecular functionGlycosidase RuleBase RU361134
Hydrolase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processcarbohydrate metabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functioncatalytic activity

Inferred from electronic annotation. Source: InterPro

cation binding

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
R4LMQ9 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: 57C6050947E5F482

FASTA54862,337
        10         20         30         40         50         60 
MSDRWYEKAV IYCLDIDTYA DSNGDGVGDI RGLIGRLDYL ARLGITCLWL NPIHPSPDKD 

        70         80         90        100        110        120 
DGYDVADFYN VDPRFGTLGD FAELLHQAQN RGIKVIIDLV VNHTSDQHPW FQSARQSPES 

       130        140        150        160        170        180 
PYRDWYVWSE TEPPDRNQGM VFPGEQKETW TYDRTAKQWF YHRFYKFQPD LNITNPQVRE 

       190        200        210        220        230        240 
EIKKICAFWL QLGVAGFRMD AVPFIIEETE PGNPDAPKDF AFLTDLRQHI QWRRGDAVLL 

       250        260        270        280        290        300 
AEANVEADQL KHFFGDQGGS ANRIHMLFDF MLNGRLMLAL ARRHPEVIID ALQDTPKLPS 

       310        320        330        340        350        360 
GAQWATFLRN HDEVDLSRLT AEQRAEVFGQ FGPDESMQLY GRGIRRRLAP MLGGDRRRLE 

       370        380        390        400        410        420 
LAYALQFSLR GTPVLRYGEE IGMGDDLSLE GRDAIRTPMQ WSSLPNGGFS TATPDELIRP 

       430        440        450        460        470        480 
VVTGGDFGYE QVNVTLQRHD PQSLLSWFER MIRTLRETPE VGSGTCKHVD IPVPAGVLVH 

       490        500        510        520        530        540 
RADADTGCMV FIHNLGPDDG VVDLSSLEPE AEYPNDVLAD QEYPDLGKMD ALPIGGFGYR 


WIRLKRFA 

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References

[1]"Comparative analysis of rapamycin biosynthesis clusters between Streptomyces hygroscopicus ATCC 29253 and Actinoplanes sp. N902-109."
Hu H., Huang H., Lu X., Zhu B.
Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: N902-109 EMBL AGL20672.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005929 Genomic DNA. Translation: AGL20672.1.
RefSeqYP_007955152.1. NC_021191.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGL20672; AGL20672; L083_7162.
GeneID15471262.
KEGGactn:L083_7162.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK05343.

Family and domain databases

Gene3D3.20.20.80. 3 hits.
InterProIPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 2 hits.
ProtoNetSearch...

Entry information

Entry nameR4LMQ9_9ACTO
AccessionPrimary (citable) accession number: R4LMQ9
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: July 9, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)