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R4LFC1

- R4LFC1_9ACTO

UniProt

R4LFC1 - R4LFC1_9ACTO

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Protein

Alpha-amylase

Gene

L083_4517

Organism
Actinoplanes sp. N902-109
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

GO - Molecular functioni

  1. alpha-amylase activity Source: UniProtKB-EC
  2. cation binding Source: InterPro
  3. starch binding Source: InterPro

GO - Biological processi

  1. carbohydrate metabolic process Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

GlycosidaseUniRule annotation, Hydrolase

Keywords - Biological processi

Carbohydrate metabolismUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Gene namesi
ORF Names:L083_4517Imported
OrganismiActinoplanes sp. N902-109Imported
Taxonomic identifieri649831 [NCBI]
Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
ProteomesiUP000013541: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Phylogenomic databases

KOiK01176.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProiIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERiPTHR10357. PTHR10357. 1 hit.
PfamiPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSiPR00110. ALPHAAMYLASE.
SMARTiSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMiSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEiPS51166. CBM20. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

R4LFC1-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MRTPKVAVTA ATVVVAAAAA VVVAFGGTGI AHASPRIIPA AAGGAGTPTT
60 70 80 90 100
ASAASPGTKD TIVHLFEWPW ASVANECTTV LGPKGFGGVQ VSPPQEHVVL
110 120 130 140 150
PGQGYPWWQD YQPVSYQLTS RRGNRAAFAA MVSTCHAAGV KIYVDAVVNH
160 170 180 190 200
MAGGASSGTG SGGSAYSHYA YPAVPYGNDD FHHCGRNGND DIVNYSDKWE
210 220 230 240 250
VQNCELVDLS DLKTESSYVR GKLTSYLNDL VSLGVDGFRV DAAKHMPAAD
260 270 280 290 300
MAAFIDPVAG DPYVFSEVIE GGSGEPTPEE YTGIGDVTEF RYGDVVGGAF
310 320 330 340 350
QSGSLSGLNG LAGQMRLASG DAVAFIDNHD TQRNGRAKLT YQNGAPYALA
360 370 380 390 400
EAFMIAYPYG VPQIMSSFTF SNNDAGPPAA SNGTTTAVSC GNGWQCEHRA
410 420 430 440 450
RTTANMVGLR NAAAGAGVTN WWSNGSNQIA FGRGSNAYVA FNRSGSALTR
460 470 480 490 500
TFQTSLPAGT YCDVMAGDFT NGTCSGPSYA VSSSGQVTAT VAANSAFALH
510 520 530 540 550
INARGGSTNP TGCTSAAVDV EATVSTTFGQ NVFVTGNTAA LGNWDPNSAV
560 570 580 590 600
ALSSASYPVW KATVTLPGNT SVQYKYIKKE GSTVIWESDP NRTRTTPGTG
610
PCTATWSDSW R
Length:611
Mass (Da):63,379
Last modified:July 24, 2013 - v1
Checksum:i59B7AFE4AFDCBF93
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005929 Genomic DNA. Translation: AGL18027.1.
RefSeqiWP_015622585.1. NC_021191.1.
YP_007952507.1. NC_021191.1.

Genome annotation databases

EnsemblBacteriaiAGL18027; AGL18027; L083_4517.
GeneIDi15468617.
KEGGiactn:L083_4517.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP005929 Genomic DNA. Translation: AGL18027.1 .
RefSeqi WP_015622585.1. NC_021191.1.
YP_007952507.1. NC_021191.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AGL18027 ; AGL18027 ; L083_4517 .
GeneIDi 15468617.
KEGGi actn:L083_4517.

Phylogenomic databases

KOi K01176.

Family and domain databases

Gene3Di 2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProi IPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view ]
PANTHERi PTHR10357. PTHR10357. 1 hit.
Pfami PF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view ]
PRINTSi PR00110. ALPHAAMYLASE.
SMARTi SM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view ]
SUPFAMi SSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEi PS51166. CBM20. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Comparative analysis of rapamycin biosynthesis clusters between Streptomyces hygroscopicus ATCC 29253 and Actinoplanes sp. N902-109."
    Hu H., Huang H., Lu X., Zhu B.
    Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: N902-109Imported.

Entry informationi

Entry nameiR4LFC1_9ACTO
AccessioniPrimary (citable) accession number: R4LFC1
Entry historyi
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: October 1, 2014
This is version 7 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3