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R4LFC1

- R4LFC1_9ACTO

UniProt

R4LFC1 - R4LFC1_9ACTO

Protein

Alpha-amylase

Gene

L083_4517

Organism
Actinoplanes sp. N902-109
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 7 (01 Oct 2014)
      Sequence version 1 (24 Jul 2013)
      Previous versions | rss
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    Functioni

    Catalytic activityi

    Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

    GO - Molecular functioni

    1. alpha-amylase activity Source: UniProtKB-EC
    2. cation binding Source: InterPro
    3. starch binding Source: InterPro

    GO - Biological processi

    1. carbohydrate metabolic process Source: UniProtKB-KW

    Keywords - Molecular functioni

    GlycosidaseUniRule annotation, Hydrolase

    Keywords - Biological processi

    Carbohydrate metabolismUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
    Gene namesi
    ORF Names:L083_4517Imported
    OrganismiActinoplanes sp. N902-109Imported
    Taxonomic identifieri649831 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesMicromonosporineaeMicromonosporaceaeActinoplanes
    ProteomesiUP000013541: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the glycosyl hydrolase 13 family.UniRule annotation

    Phylogenomic databases

    KOiK01176.

    Family and domain databases

    Gene3Di2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProiIPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view]
    PANTHERiPTHR10357. PTHR10357. 1 hit.
    PfamiPF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view]
    PRINTSiPR00110. ALPHAAMYLASE.
    SMARTiSM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEiPS51166. CBM20. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    R4LFC1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MRTPKVAVTA ATVVVAAAAA VVVAFGGTGI AHASPRIIPA AAGGAGTPTT    50
    ASAASPGTKD TIVHLFEWPW ASVANECTTV LGPKGFGGVQ VSPPQEHVVL 100
    PGQGYPWWQD YQPVSYQLTS RRGNRAAFAA MVSTCHAAGV KIYVDAVVNH 150
    MAGGASSGTG SGGSAYSHYA YPAVPYGNDD FHHCGRNGND DIVNYSDKWE 200
    VQNCELVDLS DLKTESSYVR GKLTSYLNDL VSLGVDGFRV DAAKHMPAAD 250
    MAAFIDPVAG DPYVFSEVIE GGSGEPTPEE YTGIGDVTEF RYGDVVGGAF 300
    QSGSLSGLNG LAGQMRLASG DAVAFIDNHD TQRNGRAKLT YQNGAPYALA 350
    EAFMIAYPYG VPQIMSSFTF SNNDAGPPAA SNGTTTAVSC GNGWQCEHRA 400
    RTTANMVGLR NAAAGAGVTN WWSNGSNQIA FGRGSNAYVA FNRSGSALTR 450
    TFQTSLPAGT YCDVMAGDFT NGTCSGPSYA VSSSGQVTAT VAANSAFALH 500
    INARGGSTNP TGCTSAAVDV EATVSTTFGQ NVFVTGNTAA LGNWDPNSAV 550
    ALSSASYPVW KATVTLPGNT SVQYKYIKKE GSTVIWESDP NRTRTTPGTG 600
    PCTATWSDSW R 611
    Length:611
    Mass (Da):63,379
    Last modified:July 24, 2013 - v1
    Checksum:i59B7AFE4AFDCBF93
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005929 Genomic DNA. Translation: AGL18027.1.
    RefSeqiWP_015622585.1. NC_021191.1.
    YP_007952507.1. NC_021191.1.

    Genome annotation databases

    EnsemblBacteriaiAGL18027; AGL18027; L083_4517.
    GeneIDi15468617.
    KEGGiactn:L083_4517.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP005929 Genomic DNA. Translation: AGL18027.1 .
    RefSeqi WP_015622585.1. NC_021191.1.
    YP_007952507.1. NC_021191.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AGL18027 ; AGL18027 ; L083_4517 .
    GeneIDi 15468617.
    KEGGi actn:L083_4517.

    Phylogenomic databases

    KOi K01176.

    Family and domain databases

    Gene3Di 2.60.40.10. 1 hit.
    2.60.40.1180. 1 hit.
    3.20.20.80. 1 hit.
    InterProi IPR006048. A-amylase_b_C.
    IPR006046. Alpha_amylase.
    IPR013784. Carb-bd-like_fold.
    IPR002044. CBM_fam20.
    IPR015902. Glyco_hydro_13.
    IPR013780. Glyco_hydro_13_b.
    IPR006047. Glyco_hydro_13_cat_dom.
    IPR006589. Glyco_hydro_13_sub_cat_dom.
    IPR013781. Glyco_hydro_catalytic_dom.
    IPR017853. Glycoside_hydrolase_SF.
    IPR013783. Ig-like_fold.
    [Graphical view ]
    PANTHERi PTHR10357. PTHR10357. 1 hit.
    Pfami PF00128. Alpha-amylase. 1 hit.
    PF02806. Alpha-amylase_C. 1 hit.
    PF00686. CBM_20. 1 hit.
    [Graphical view ]
    PRINTSi PR00110. ALPHAAMYLASE.
    SMARTi SM00642. Aamy. 1 hit.
    SM00632. Aamy_C. 1 hit.
    SM01065. CBM_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49452. SSF49452. 1 hit.
    SSF51445. SSF51445. 1 hit.
    PROSITEi PS51166. CBM20. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Comparative analysis of rapamycin biosynthesis clusters between Streptomyces hygroscopicus ATCC 29253 and Actinoplanes sp. N902-109."
      Hu H., Huang H., Lu X., Zhu B.
      Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: N902-109Imported.

    Entry informationi

    Entry nameiR4LFC1_9ACTO
    AccessioniPrimary (citable) accession number: R4LFC1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: July 24, 2013
    Last sequence update: July 24, 2013
    Last modified: October 1, 2014
    This is version 7 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3