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R4LFC1 (R4LFC1_9ACTO) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 5. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length611 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units. RuleBase RU361134

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Ontologies

Sequences

Sequence LengthMass (Da)Tools
R4LFC1 [UniParc].

Last modified July 24, 2013. Version 1.
Checksum: 59B7AFE4AFDCBF93

FASTA61163,379
        10         20         30         40         50         60 
MRTPKVAVTA ATVVVAAAAA VVVAFGGTGI AHASPRIIPA AAGGAGTPTT ASAASPGTKD 

        70         80         90        100        110        120 
TIVHLFEWPW ASVANECTTV LGPKGFGGVQ VSPPQEHVVL PGQGYPWWQD YQPVSYQLTS 

       130        140        150        160        170        180 
RRGNRAAFAA MVSTCHAAGV KIYVDAVVNH MAGGASSGTG SGGSAYSHYA YPAVPYGNDD 

       190        200        210        220        230        240 
FHHCGRNGND DIVNYSDKWE VQNCELVDLS DLKTESSYVR GKLTSYLNDL VSLGVDGFRV 

       250        260        270        280        290        300 
DAAKHMPAAD MAAFIDPVAG DPYVFSEVIE GGSGEPTPEE YTGIGDVTEF RYGDVVGGAF 

       310        320        330        340        350        360 
QSGSLSGLNG LAGQMRLASG DAVAFIDNHD TQRNGRAKLT YQNGAPYALA EAFMIAYPYG 

       370        380        390        400        410        420 
VPQIMSSFTF SNNDAGPPAA SNGTTTAVSC GNGWQCEHRA RTTANMVGLR NAAAGAGVTN 

       430        440        450        460        470        480 
WWSNGSNQIA FGRGSNAYVA FNRSGSALTR TFQTSLPAGT YCDVMAGDFT NGTCSGPSYA 

       490        500        510        520        530        540 
VSSSGQVTAT VAANSAFALH INARGGSTNP TGCTSAAVDV EATVSTTFGQ NVFVTGNTAA 

       550        560        570        580        590        600 
LGNWDPNSAV ALSSASYPVW KATVTLPGNT SVQYKYIKKE GSTVIWESDP NRTRTTPGTG 

       610 
PCTATWSDSW R 

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References

[1]"Comparative analysis of rapamycin biosynthesis clusters between Streptomyces hygroscopicus ATCC 29253 and Actinoplanes sp. N902-109."
Hu H., Huang H., Lu X., Zhu B.
Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: N902-109 EMBL AGL18027.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP005929 Genomic DNA. Translation: AGL18027.1.
RefSeqYP_007952507.1. NC_021191.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGL18027; AGL18027; L083_4517.
GeneID15468617.
KEGGactn:L083_4517.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.10. 1 hit.
2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR006048. A-amylase_b_C.
IPR006046. Alpha_amylase.
IPR013784. Carb-bd-like_fold.
IPR002044. CBM_fam20.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
IPR013783. Ig-like_fold.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF00128. Alpha-amylase. 1 hit.
PF02806. Alpha-amylase_C. 1 hit.
PF00686. CBM_20. 1 hit.
[Graphical view]
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00632. Aamy_C. 1 hit.
SM01065. CBM_2. 1 hit.
[Graphical view]
SUPFAMSSF49452. SSF49452. 1 hit.
SSF51445. SSF51445. 1 hit.
PROSITEPS51166. CBM20. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameR4LFC1_9ACTO
AccessionPrimary (citable) accession number: R4LFC1
Entry history
Integrated into UniProtKB/TrEMBL: July 24, 2013
Last sequence update: July 24, 2013
Last modified: July 9, 2014
This is version 5 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)