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Protein
Submitted name:

Lysine-specific histone demethylase 1A

Gene

KDM1A

Organism
Homo sapiens (Human)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Names & Taxonomyi

Protein namesi
Submitted name:
Lysine-specific histone demethylase 1AImported
Gene namesi
Name:KDM1AImported
OrganismiHomo sapiens (Human)Imported
Taxonomic identifieri9606 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo
Proteomesi
  • UP000005640 Componenti: Chromosome 1

Organism-specific databases

EuPathDBiHostDB:ENSG00000004487.15.
HGNCiHGNC:29079. KDM1A.

Pathology & Biotechi

Organism-specific databases

OpenTargetsiENSG00000004487.

PTM / Processingi

Proteomic databases

PaxDbiR4GMP9.
PeptideAtlasiR4GMP9.
PRIDEiR4GMP9.

Expressioni

Gene expression databases

BgeeiENSG00000004487.
ExpressionAtlasiR4GMP9. baseline and differential.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 277Amino_oxidaseInterPro annotationAdd BLAST276

Phylogenomic databases

eggNOGiKOG0029. Eukaryota.
KOG0685. Eukaryota.
ENOG410XSNC. LUCA.
GeneTreeiENSGT00530000062888.

Family and domain databases

Gene3Di3.50.50.60. 1 hit.
InterProiView protein in InterPro
IPR002937. Amino_oxidase.
IPR036188. FAD/NAD-bd_sf.
PfamiView protein in Pfam
PF01593. Amino_oxidase. 1 hit.
SUPFAMiSSF51905. SSF51905. 3 hits.

Sequencei

Sequence statusi: Fragment.

R4GMP9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
DFEFTGSHLT VRNGYSCVPV ALAEGLDIKL NTAVRQVRYT ASVFSHPTSA
60 70 80 90 100
GCEVIAVNTR STSQTFIYKC DAVLCTLPLG VLKQQPPAVQ FVPPLPEWKT
110 120 130 140 150
SAVQRMGFGN LNKVVLCFDR VFWDPSVNLF GHVGSTTASR GELFLFWNLY
160 170 180 190 200
KAPILLALVA GEAAGIMENI SDDVIVGRCL AILKGIFGSS AVPQPKETVV
210 220 230 240 250
SRWRADPWAR GSYSYVAAGS SGNDYDLMAQ PITPGPSIPG APQPIPRLFF
260 270 280 290 300
AGEHTIRNYP ATVHGALLSG LREAGRIADQ FLGAMYTLPR QATPGVPAQQ

S
Length:301
Mass (Da):32,412
Last modified:October 5, 2016 - v8
Checksum:i4A1E07B422035E79
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei1Imported1
Non-terminal residuei301Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AL031428 Genomic DNA. No translation available.

Genome annotation databases

EnsembliENST00000494920; ENSP00000473294; ENSG00000004487.
UCSCiuc057dep.1. human.

Similar proteinsi

Entry informationi

Entry nameiR4GMP9_HUMAN
AccessioniPrimary (citable) accession number: R4GMP9
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: October 5, 2016
Last modified: October 25, 2017
This is version 30 of the entry and version 8 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)
DisclaimerAny medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care.

Miscellaneousi

Caution

The sequence shown here is derived from an Ensembl automatic analysis pipeline and should be considered as preliminary data.Imported

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported