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Protein
Submitted name:

Coagulation factor XIII A chain

Gene

F13A1

Organism
Anas platyrhynchos (Mallard) (Anas boschas)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei322 – 3221UniRule annotation
Active sitei381 – 3811UniRule annotation
Active sitei404 – 4041UniRule annotation

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Coagulation factor XIII A chainImported
Submitted name:
Uncharacterized proteinImported
Gene namesi
Name:F13A1Imported
ORF Names:Anapl_03796Imported
OrganismiAnas platyrhynchos (Mallard) (Anas boschas)Imported
Taxonomic identifieri8839 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeAnseriformesAnatidaeAnas
ProteomesiUP000016666 Componenti: Unassembled WGS sequence

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00760000119108.
KOiK03917.
OMAiCEEDAVY.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Fragment.

R0KCX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEPTSTDKE KKKPPLNGRR ALPSNNSNAE ENEVPEMDAF GLIPRGFNPK
60 70 80 90 100
DYLCVVDIHM FKEPYEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFNRPY
110 120 130 140 150
KPETDQFWLE YLIGRYPQPN KGTYIPILVG DVLKPGEWGA KIIHKENNSI
160 170 180 190 200
RLSIMSSATC IVGKFRLYVA IWTPFGIIRT HRNSATDTYI LFNPWCQQDA
210 220 230 240 250
VYLDDEKERE EYVLNDVGIV FHGDIDEIKL RSWSYGQFEE NILDACLFLM
260 270 280 290 300
DKAELELSGR GNPIKICRVA SAVINSRDDN GVIAGSWDNT YTYGVAPSAW
310 320 330 340 350
TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH
360 370 380 390 400
DNNANLQLDF FLDDEGQVDA KLTKDSIWNY HCWNEAWMTR PDLPVGFGGW
410 420 430 440 450
QAVDGTPQET SDGMYRCGPA SVQAIKHGHV CFQFDAPFVF AEVNSDVVYS
460 470 480 490 500
RREKNGAQII EKIDTTHIGK LIVTKGVGTD EMVEITEEYK FQEGSEEERL
510 520 530 540 550
ALETAVMYGV KKQSTQDDMY QPQKDVEMDF QVQKAVLGSD FKVTITFRNK
560 570 580 590 600
SRNSYTATTY LSGNIVFYTG VTKNEFKKHS FTVKLEPLMS SAFDVIITSS
610 620 630 640 650
EYLSDLLDQA SFHFFVTARI NETGKILAAQ KATVLEIPSL RIKTQGEMVA
660 670 680 690 700
DKEMSVIVEF TNPLKKTLED VTLRLEGPGV LKTMKKEFRQ IPSNSTLIWE
710 720 730
VKCIPKRPGL RKLIASLNCD ALRHVYGELS IQIQKP
Length:736
Mass (Da):83,769
Last modified:June 26, 2013 - v1
Checksum:i6D84142A7CA32477
GO

Experimental Info

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Non-terminal residuei736 – 7361Imported

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADON01012010 Genomic DNA. No translation available.
ADON01012011 Genomic DNA. No translation available.
ADON01012012 Genomic DNA. No translation available.
KB742490 Genomic DNA. Translation: EOB07792.1.
RefSeqiXP_005010762.1. XM_005010705.1.
XP_005010763.1. XM_005010706.1.

Genome annotation databases

EnsembliENSAPLT00000005217; ENSAPLP00000004601; ENSAPLG00000005008.
GeneIDi101800928.
KEGGiapla:101800928.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADON01012010 Genomic DNA. No translation available.
ADON01012011 Genomic DNA. No translation available.
ADON01012012 Genomic DNA. No translation available.
KB742490 Genomic DNA. Translation: EOB07792.1.
RefSeqiXP_005010762.1. XM_005010705.1.
XP_005010763.1. XM_005010706.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsembliENSAPLT00000005217; ENSAPLP00000004601; ENSAPLG00000005008.
GeneIDi101800928.
KEGGiapla:101800928.

Organism-specific databases

CTDi2162.

Phylogenomic databases

GeneTreeiENSGT00760000119108.
KOiK03917.
OMAiCEEDAVY.

Family and domain databases

Gene3Di2.60.40.10. 3 hits.
3.90.260.10. 1 hit.
InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
IPR013783. Ig-like_fold.
IPR014756. Ig_E-set.
IPR002931. Transglutaminase-like.
IPR008958. Transglutaminase_C.
IPR013808. Transglutaminase_CS.
IPR001102. Transglutaminase_N.
[Graphical view]
PANTHERiPTHR11590. PTHR11590. 1 hit.
PfamiPF00927. Transglut_C. 2 hits.
PF01841. Transglut_core. 1 hit.
PF00868. Transglut_N. 1 hit.
[Graphical view]
PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
SMARTiSM00460. TGc. 1 hit.
[Graphical view]
SUPFAMiSSF49309. SSF49309. 2 hits.
SSF81296. SSF81296. 1 hit.
PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The genome sequence and transcriptome of duck provide insight into the interaction host."
    Li N.
    Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  2. Cited for: NUCLEOTIDE SEQUENCE.
  3. Ensembl
    Submitted (SEP-2013) to UniProtKB
    Cited for: IDENTIFICATION.

Entry informationi

Entry nameiR0KCX2_ANAPL
AccessioniPrimary (citable) accession number: R0KCX2
Entry historyi
Integrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: July 22, 2015
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.