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R0KCX2

- R0KCX2_ANAPL

UniProt

R0KCX2 - R0KCX2_ANAPL

Protein
Submitted name:

Coagulation factor XIII A chain

Gene

F13A1

Organism
Anas platyrhynchos (Domestic duck) (Anas boschas)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 13 (01 Oct 2014)
      Sequence version 1 (26 Jun 2013)
      Previous versions | rss
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    Functioni

    Cofactori

    Binds 1 calcium ion per subunit.UniRule annotation

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei322 – 3221UniRule annotation
    Active sitei381 – 3811UniRule annotation
    Active sitei404 – 4041UniRule annotation
    Metal bindingi444 – 4441CalciumUniRule annotation
    Metal bindingi446 – 4461CalciumUniRule annotation
    Metal bindingi493 – 4931CalciumUniRule annotation
    Metal bindingi498 – 4981CalciumUniRule annotation

    GO - Molecular functioni

    1. metal ion binding Source: UniProtKB-KW
    2. protein-glutamine gamma-glutamyltransferase activity Source: Ensembl

    GO - Biological processi

    1. blood coagulation Source: Ensembl
    2. peptide cross-linking Source: Ensembl

    Keywords - Ligandi

    CalciumUniRule annotation, Metal-bindingUniRule annotation

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Coagulation factor XIII A chainImported
    Submitted name:
    Uncharacterized proteinImported
    Gene namesi
    Name:F13A1Imported
    ORF Names:Anapl_03796Imported
    OrganismiAnas platyrhynchos (Domestic duck) (Anas boschas)Imported
    Taxonomic identifieri8839 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiTestudines + Archosauria groupArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeAnseriformesAnatidaeAnas
    ProteomesiUP000016666: Unplaced

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00740000115156.
    KOiK03917.
    OMAiCEEDAVY.

    Family and domain databases

    Gene3Di2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProiIPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view]
    PANTHERiPTHR11590. PTHR11590. 1 hit.
    PfamiPF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view]
    PIRSFiPIRSF000459. TGM_EBP42. 1 hit.
    SMARTiSM00460. TGc. 1 hit.
    [Graphical view]
    SUPFAMiSSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEiPS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Fragment.

    R0KCX2-1 [UniParc]FASTAAdd to Basket

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    MSEPTSTDKE KKKPPLNGRR ALPSNNSNAE ENEVPEMDAF GLIPRGFNPK    50
    DYLCVVDIHM FKEPYEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFNRPY 100
    KPETDQFWLE YLIGRYPQPN KGTYIPILVG DVLKPGEWGA KIIHKENNSI 150
    RLSIMSSATC IVGKFRLYVA IWTPFGIIRT HRNSATDTYI LFNPWCQQDA 200
    VYLDDEKERE EYVLNDVGIV FHGDIDEIKL RSWSYGQFEE NILDACLFLM 250
    DKAELELSGR GNPIKICRVA SAVINSRDDN GVIAGSWDNT YTYGVAPSAW 300
    TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH 350
    DNNANLQLDF FLDDEGQVDA KLTKDSIWNY HCWNEAWMTR PDLPVGFGGW 400
    QAVDGTPQET SDGMYRCGPA SVQAIKHGHV CFQFDAPFVF AEVNSDVVYS 450
    RREKNGAQII EKIDTTHIGK LIVTKGVGTD EMVEITEEYK FQEGSEEERL 500
    ALETAVMYGV KKQSTQDDMY QPQKDVEMDF QVQKAVLGSD FKVTITFRNK 550
    SRNSYTATTY LSGNIVFYTG VTKNEFKKHS FTVKLEPLMS SAFDVIITSS 600
    EYLSDLLDQA SFHFFVTARI NETGKILAAQ KATVLEIPSL RIKTQGEMVA 650
    DKEMSVIVEF TNPLKKTLED VTLRLEGPGV LKTMKKEFRQ IPSNSTLIWE 700
    VKCIPKRPGL RKLIASLNCD ALRHVYGELS IQIQKP 736
    Length:736
    Mass (Da):83,769
    Last modified:June 26, 2013 - v1
    Checksum:i6D84142A7CA32477
    GO

    Experimental Info

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Non-terminal residuei736 – 7361Imported

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ADON01012010 Genomic DNA. No translation available.
    ADON01012011 Genomic DNA. No translation available.
    ADON01012012 Genomic DNA. No translation available.
    KB742490 Genomic DNA. Translation: EOB07792.1.
    RefSeqiXP_005010762.1. XM_005010705.1.
    XP_005010763.1. XM_005010706.1.

    Genome annotation databases

    EnsembliENSAPLT00000005217; ENSAPLP00000004601; ENSAPLG00000005008.
    GeneIDi101800928.
    KEGGiapla:101800928.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    ADON01012010 Genomic DNA. No translation available.
    ADON01012011 Genomic DNA. No translation available.
    ADON01012012 Genomic DNA. No translation available.
    KB742490 Genomic DNA. Translation: EOB07792.1 .
    RefSeqi XP_005010762.1. XM_005010705.1.
    XP_005010763.1. XM_005010706.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSAPLT00000005217 ; ENSAPLP00000004601 ; ENSAPLG00000005008 .
    GeneIDi 101800928.
    KEGGi apla:101800928.

    Organism-specific databases

    CTDi 2162.

    Phylogenomic databases

    GeneTreei ENSGT00740000115156.
    KOi K03917.
    OMAi CEEDAVY.

    Family and domain databases

    Gene3Di 2.60.40.10. 3 hits.
    3.90.260.10. 1 hit.
    InterProi IPR023608. Gln_gamma-glutamylTfrase_euk.
    IPR013783. Ig-like_fold.
    IPR014756. Ig_E-set.
    IPR002931. Transglutaminase-like.
    IPR008958. Transglutaminase_C.
    IPR013808. Transglutaminase_CS.
    IPR001102. Transglutaminase_N.
    [Graphical view ]
    PANTHERi PTHR11590. PTHR11590. 1 hit.
    Pfami PF00927. Transglut_C. 2 hits.
    PF01841. Transglut_core. 1 hit.
    PF00868. Transglut_N. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF000459. TGM_EBP42. 1 hit.
    SMARTi SM00460. TGc. 1 hit.
    [Graphical view ]
    SUPFAMi SSF49309. SSF49309. 2 hits.
    SSF81296. SSF81296. 1 hit.
    PROSITEi PS00547. TRANSGLUTAMINASES. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The genome sequence and transcriptome of duck provide insight into the interaction host."
      Li N.
      Submitted (APR-2010) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    2. Cited for: NUCLEOTIDE SEQUENCE.
    3. Ensembl
      Submitted (SEP-2013) to UniProtKB
      Cited for: IDENTIFICATION.

    Entry informationi

    Entry nameiR0KCX2_ANAPL
    AccessioniPrimary (citable) accession number: R0KCX2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: June 26, 2013
    Last sequence update: June 26, 2013
    Last modified: October 1, 2014
    This is version 13 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3