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Protein
Submitted name:

Coagulation factor XIII A chain

Gene

F13A1

Organism
Anas platyrhynchos (Mallard) (Anas boschas)
Status
Unreviewed-Annotation score: -Protein predictedi

Functioni

Cofactori

Ca2+UniRule annotationNote: Binds 1 Ca2+ ion per subunit.UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei322UniRule annotation1
Active sitei381UniRule annotation1
Active sitei404UniRule annotation1
Metal bindingi444CalciumUniRule annotation1
Metal bindingi446CalciumUniRule annotation1
Metal bindingi493CalciumUniRule annotation1
Metal bindingi498CalciumUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

LigandCalciumUniRule annotation, Metal-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Coagulation factor XIII A chainImported
Gene namesi
Name:F13A1Imported
ORF Names:Anapl_03796Imported
OrganismiAnas platyrhynchos (Mallard) (Anas boschas)Imported
Taxonomic identifieri8839 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeAnseriformesAnatidaeAnatinaeAnas
Proteomesi
  • UP000016666 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini314 – 407TGcInterPro annotationAdd BLAST94

Phylogenomic databases

GeneTreeiENSGT00760000119108
KOiK03917
OMAiCEEDAVY
OrthoDBiEOG091G030K

Family and domain databases

Gene3Di2.60.40.10, 3 hits
3.90.260.10, 1 hit
InterProiView protein in InterPro
IPR034810 Factor_XIII_A
IPR013783 Ig-like_fold
IPR014756 Ig_E-set
IPR002931 Transglutaminase-like
IPR036985 Transglutaminase-like_sf
IPR023608 Transglutaminase_animal
IPR013808 Transglutaminase_AS
IPR008958 Transglutaminase_C
IPR036238 Transglutaminase_C_sf
IPR001102 Transglutaminase_N
PANTHERiPTHR11590:SF42 PTHR11590:SF42, 1 hit
PfamiView protein in Pfam
PF00927 Transglut_C, 2 hits
PF01841 Transglut_core, 1 hit
PF00868 Transglut_N, 1 hit
PIRSFiPIRSF000459 TGM_EBP42, 1 hit
SMARTiView protein in SMART
SM00460 TGc, 1 hit
SUPFAMiSSF49309 SSF49309, 2 hits
SSF81296 SSF81296, 1 hit
PROSITEiView protein in PROSITE
PS00547 TRANSGLUTAMINASES, 1 hit

Sequencei

Sequence statusi: Fragment.

R0KCX2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSEPTSTDKE KKKPPLNGRR ALPSNNSNAE ENEVPEMDAF GLIPRGFNPK
60 70 80 90 100
DYLCVVDIHM FKEPYEINKQ QHHTDKYYNP KLIVRRGQPF QIQIDFNRPY
110 120 130 140 150
KPETDQFWLE YLIGRYPQPN KGTYIPILVG DVLKPGEWGA KIIHKENNSI
160 170 180 190 200
RLSIMSSATC IVGKFRLYVA IWTPFGIIRT HRNSATDTYI LFNPWCQQDA
210 220 230 240 250
VYLDDEKERE EYVLNDVGIV FHGDIDEIKL RSWSYGQFEE NILDACLFLM
260 270 280 290 300
DKAELELSGR GNPIKICRVA SAVINSRDDN GVIAGSWDNT YTYGVAPSAW
310 320 330 340 350
TGSVDILLEY YSSKQPVRYG QCWVFAGVFN TFLRCLGIPA RLITNYSSAH
360 370 380 390 400
DNNANLQLDF FLDDEGQVDA KLTKDSIWNY HCWNEAWMTR PDLPVGFGGW
410 420 430 440 450
QAVDGTPQET SDGMYRCGPA SVQAIKHGHV CFQFDAPFVF AEVNSDVVYS
460 470 480 490 500
RREKNGAQII EKIDTTHIGK LIVTKGVGTD EMVEITEEYK FQEGSEEERL
510 520 530 540 550
ALETAVMYGV KKQSTQDDMY QPQKDVEMDF QVQKAVLGSD FKVTITFRNK
560 570 580 590 600
SRNSYTATTY LSGNIVFYTG VTKNEFKKHS FTVKLEPLMS SAFDVIITSS
610 620 630 640 650
EYLSDLLDQA SFHFFVTARI NETGKILAAQ KATVLEIPSL RIKTQGEMVA
660 670 680 690 700
DKEMSVIVEF TNPLKKTLED VTLRLEGPGV LKTMKKEFRQ IPSNSTLIWE
710 720 730
VKCIPKRPGL RKLIASLNCD ALRHVYGELS IQIQKP
Length:736
Mass (Da):83,769
Last modified:June 26, 2013 - v1
Checksum:i6D84142A7CA32477
GO

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Non-terminal residuei736Imported1

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
ADON01012010 Genomic DNA No translation available.
ADON01012011 Genomic DNA No translation available.
ADON01012012 Genomic DNA No translation available.
KB742490 Genomic DNA Translation: EOB07792.1
RefSeqiXP_005010762.1, XM_005010705.2
XP_005010763.1, XM_005010706.2

Genome annotation databases

EnsembliENSAPLT00000005217; ENSAPLP00000004601; ENSAPLG00000005008
GeneIDi101800928
KEGGiapla:101800928

Similar proteinsi

Entry informationi

Entry nameiR0KCX2_ANAPL
AccessioniPrimary (citable) accession number: R0KCX2
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: April 25, 2018
This is version 34 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health