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Protein

Lipoxygenase

Gene

CARUB_v10019783mg

Organism
Capsella rubella
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.UniRule annotation

Cofactori

Fe cationSAAS annotation

Pathwayi: oxylipin biosynthesis

This protein is involved in the pathway oxylipin biosynthesis, which is part of Lipid metabolism.UniRule annotation
View all proteins of this organism that are known to be involved in the pathway oxylipin biosynthesis and in Lipid metabolism.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDioxygenaseSAAS annotation, Oxidoreductase
Biological processFatty acid biosynthesis, Fatty acid metabolism, Lipid biosynthesis, Lipid metabolism, Oxylipin biosynthesisUniRule annotation
LigandIronSAAS annotation, Metal-bindingSAAS annotation

Enzyme and pathway databases

UniPathwayiUPA00382.

Names & Taxonomyi

Protein namesi
Recommended name:
LipoxygenaseUniRule annotation (EC:1.13.11.-UniRule annotation)
Gene namesi
ORF Names:CARUB_v10019783mgImported
OrganismiCapsella rubellaImported
Taxonomic identifieri81985 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeCapsella
Proteomesi
  • UP000029121 Componenti: Unassembled WGS sequence

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini36 – 161PLATInterPro annotationAdd BLAST126
Domaini164 – 859LipoxygenaseInterPro annotationAdd BLAST696

Sequence similaritiesi

Belongs to the lipoxygenase family.UniRule annotation

Phylogenomic databases

KOiK15718.

Family and domain databases

Gene3Di4.10.372.10. 1 hit.
InterProiView protein in InterPro
IPR000907. LipOase.
IPR013819. LipOase_C.
IPR036226. LipOase_C_sf.
IPR020834. LipOase_CS.
IPR001246. LipOase_plant.
IPR027433. Lipoxygenase_dom_3.
IPR001024. PLAT/LH2_dom.
IPR036392. PLAT/LH2_dom_sf.
PANTHERiPTHR11771. PTHR11771. 1 hit.
PfamiView protein in Pfam
PF00305. Lipoxygenase. 1 hit.
PF01477. PLAT. 1 hit.
PRINTSiPR00087. LIPOXYGENASE.
PR00468. PLTLPOXGNASE.
SMARTiView protein in SMART
SM00308. LH2. 1 hit.
SUPFAMiSSF48484. SSF48484. 1 hit.
SSF49723. SSF49723. 1 hit.
PROSITEiView protein in PROSITE
PS00081. LIPOXYGENASE_2. 1 hit.
PS51393. LIPOXYGENASE_3. 1 hit.
PS50095. PLAT. 1 hit.

Sequencei

Sequence statusi: Complete.

R0GC28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIGELVDLFT GGGNETTAKK VKGTVVLIKK NVLDFNDFNA SFLDRLHEFL
60 70 80 90 100
NNKITLRLIS SDVTDSANGS KGKLGKAAHL EDWITTITSL TAGESAFKVT
110 120 130 140 150
FDYDSDFGYP GAFLIRNSHF SEFFLKSLTL EDVPGHGRVH YICNSWIYPS
160 170 180 190 200
KHYTKDRVFF SNKTYLPHET PATLLKYREE ELLDLRGTGE GELKEWDRVY
210 220 230 240 250
DYAYYNDLGV PPNNPRPVLG GTQEYPYPRR GRTGRKPTKE DPKTESRLPV
260 270 280 290 300
TSSLDIYVPR DERFGHLKMS DFLAYALKAI AQFIQPALEA VFDDTPKEFD
310 320 330 340 350
SFEDVLKIYE EGIDLPNQAL IDSIVKNIPL EMLREIFRTD GQKFLKYPVP
360 370 380 390 400
QVIKEDKTAW RTDEEFAREM LAGLNPVVIQ LLQEFPPKSK LESELYGNQN
410 420 430 440 450
STITKSHIEH NLDGLTVEEA LEKERLFILD HHDTLMPYLG RINTTTTKTY
460 470 480 490 500
ASRTVLFLKD DGTLKPLVIE LSLPHPDGDK FGAVSEVYTP GEGVYDSLWQ
510 520 530 540 550
LAKAFVGVND SGNHQLISHW TQTHASIEPF VIATNRQLSV LHPVFKLLEP
560 570 580 590 600
HFRDTMNINA LARQILINGG GIFEITVFPS KYAMEMSSFI YKHHWTFPDQ
610 620 630 640 650
ALPAELKKRG MAVEDPEAPH GLRLRIKDYP YAVDGLEVWY AIESWVRDYI
660 670 680 690 700
NVYYKKDEDI QNDTELQAWW KEVREEGHGD KNSEPWWPKM QNREELIESC
710 720 730 740 750
TIIIWVASAL HAAVNFGQYP IAGYLPNRPT ISRQFIPKQN TPEFEELEKN
760 770 780 790 800
PDKVFLKTIT AQLQTLLGIS LIEILSTHSS DEVYLGQRDS KEWAAEKEAL
810 820 830 840 850
DAFEKFGEKV KEIEKNIDER NDDKSLKNRT GLVKMPYTLL FPTSEGGVTG

RGIPNSVSI
Length:859
Mass (Da):98,054
Last modified:June 26, 2013 - v1
Checksum:i5B3788EF54F49177
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
KB870806 Genomic DNA. Translation: EOA33292.1.
RefSeqiXP_006300394.1. XM_006300332.1.

Genome annotation databases

GeneIDi17894417.
KEGGicrb:CARUB_v10019783mg.

Similar proteinsi

Entry informationi

Entry nameiR0GC28_9BRAS
AccessioniPrimary (citable) accession number: R0GC28
Entry historyiIntegrated into UniProtKB/TrEMBL: June 26, 2013
Last sequence update: June 26, 2013
Last modified: March 28, 2018
This is version 29 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported