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Protein
Submitted name:

Cytochrome C-type biogenesis protein CCMF

Gene

yejR or ccmF

Organism
Cyanidioschyzon merolae (Red alga)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Protein family/group databases

TCDBi9.B.14.1.4. the putative heme handling protein (hhp) family.

Names & Taxonomyi

Protein namesi
Submitted name:
Cytochrome C-type biogenesis protein CCMFImported
Gene namesi
Name:yejR or ccmFImported
Encoded oniMitochondrionImported
OrganismiCyanidioschyzon merolae (Red alga)Imported
Taxonomic identifieri45157 [NCBI]
Taxonomic lineageiEukaryotaRhodophytaBangiophyceaeCyanidialesCyanidiaceaeCyanidioschyzon

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2722HelicalSequence analysisAdd
BLAST
Transmembranei48 – 7528HelicalSequence analysisAdd
BLAST
Transmembranei100 – 11819HelicalSequence analysisAdd
BLAST
Transmembranei130 – 15223HelicalSequence analysisAdd
BLAST
Transmembranei183 – 20422HelicalSequence analysisAdd
BLAST
Transmembranei216 – 23318HelicalSequence analysisAdd
BLAST
Transmembranei253 – 27119HelicalSequence analysisAdd
BLAST
Transmembranei283 – 30523HelicalSequence analysisAdd
BLAST
Transmembranei317 – 33721HelicalSequence analysisAdd
BLAST
Transmembranei357 – 37822HelicalSequence analysisAdd
BLAST
Transmembranei398 – 41518HelicalSequence analysisAdd
BLAST
Transmembranei420 – 43617HelicalSequence analysisAdd
BLAST
Transmembranei442 – 45817HelicalSequence analysisAdd
BLAST
Transmembranei465 – 48521HelicalSequence analysisAdd
BLAST
Transmembranei593 – 61321HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionImported

Interactioni

Protein-protein interaction databases

STRINGi45157.CMW028CT.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini92 – 304213Cytochrom_C_asmInterPro annotationAdd
BLAST
Domaini461 – 605145CcmF_CInterPro annotationAdd
BLAST

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Phylogenomic databases

eggNOGiCOG1138. LUCA.
OMAiIFIAKFR.

Family and domain databases

InterProiIPR032523. CcmF_C.
IPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 2 hits.
PfamiPF16327. CcmF_C. 1 hit.
PF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.

Sequencei

Sequence statusi: Complete.

Q9ZZP7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFGYVLHFLL IFIFIYSCNF FFLDSFYKYK KVTTLLEIVH HYYFYFNYIY
60 70 80 90 100
NIIIIIIWLI GIILLLSDFS ILFVVELSSV NQPSLYKLIT LWSNNEGSLF
110 120 130 140 150
LGYFLQFIIY FTFINYFINK LTLIVKLTFF YNVYFILFNI SFLSLTLLLI
160 170 180 190 200
FLRFDFFFNF TVLEGNELNF LLQDINILIH PPLIYISYAS YSIIFSISFT
210 220 230 240 250
ILIIKCKFYV LYILRFLNLI GWFIASFSIL LGSRWAYTEL GWGGFWFWDS
260 270 280 290 300
VEIISLLPWL LSLALLHSLL LNLKFCIIRL DSLFLGMAIY FVIIIGIILV
310 320 330 340 350
RSGLLQSVHT FVNSPNFLII FLYFFLVFIF ILIVILLKKY TYFTSIFDLN
360 370 380 390 400
NHYNFVYYIF LLVILYFLYL LFVLYFPFLI KCYNDNALLF SFGFFNKILL
410 420 430 440 450
LFIGILLTLI IIFLINSWKL IFIFLGIIII GGIRGFPEIF LALYFFIYLL
460 470 480 490 500
LFTLILIIKQ KFSFIVYHFN FFFIMLSLLL ITIYGEEFIL NFSIGKTLLL
510 520 530 540 550
NDNFIIIFRD LNHIWSTNYL STYGNFLITD FHNPMCYENI QNVLFSEKRF
560 570 580 590 600
YLYQSLINTK SIIYTNLMSD VYILLGDGNF ENGWYSRILF MPFISWFWLG
610 620
GIFLLDSIIF SLFRCIKNFQ
Length:620
Mass (Da):74,170
Last modified:May 1, 1999 - v1
Checksum:i1BBF643AC026762D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D89861 Genomic DNA. Translation: BAA36527.1.
PIRiA58932.
RefSeqiNP_059365.1. NC_000887.3.

Genome annotation databases

EnsemblPlantsiCMW028CT; CMW028CT; CMW028C.
GeneIDi3125665.
GrameneiCMW028CT; CMW028CT; CMW028C.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D89861 Genomic DNA. Translation: BAA36527.1.
PIRiA58932.
RefSeqiNP_059365.1. NC_000887.3.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi45157.CMW028CT.

Protein family/group databases

TCDBi9.B.14.1.4. the putative heme handling protein (hhp) family.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiCMW028CT; CMW028CT; CMW028C.
GeneIDi3125665.
GrameneiCMW028CT; CMW028CT; CMW028C.

Phylogenomic databases

eggNOGiCOG1138. LUCA.
OMAiIFIAKFR.

Family and domain databases

InterProiIPR032523. CcmF_C.
IPR002541. Cyt_c_assembly.
IPR003567. Cyt_c_biogenesis.
[Graphical view]
PANTHERiPTHR30009:SF0. PTHR30009:SF0. 2 hits.
PfamiPF16327. CcmF_C. 1 hit.
PF01578. Cytochrom_C_asm. 1 hit.
[Graphical view]
PRINTSiPR01410. CCBIOGENESIS.
ProtoNetiSearch...

Publicationsi

  1. "Structure and organization of the mitochondrial genome of the unicellular red alga Cyanidioschyzon merolae deduced from the complete nucleotide sequence."
    Ohta N., Sato N., Kuroiwa T.
    Nucleic Acids Res. 26:5190-5198(1998)
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 10DImported.

Entry informationi

Entry nameiQ9ZZP7_CYAME
AccessioniPrimary (citable) accession number: Q9ZZP7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: May 11, 2016
This is version 50 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.