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Protein

NADH-ubiquinone oxidoreductase chain 5

Gene

nad5

Organism
Pedinomonas minor
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

NADH + ubiquinone + 5 H+(In) = NAD+ + ubiquinol + 4 H+(Out).UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

NADUniRule annotation, UbiquinoneUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
NADH-ubiquinone oxidoreductase chain 5UniRule annotation (EC:1.6.5.3UniRule annotation)
Gene namesi
Name:nad5Imported
Encoded oniMitochondrionImported
OrganismiPedinomonas minorImported
Taxonomic identifieri3159 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaPedinophyceaePedinomonadalesPedinomonadaceaePedinomonas

Subcellular locationi

  • Mitochondrion inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei6 – 2419HelicalSequence analysisAdd
BLAST
Transmembranei36 – 5621HelicalSequence analysisAdd
BLAST
Transmembranei76 – 10126HelicalSequence analysisAdd
BLAST
Transmembranei113 – 13018HelicalSequence analysisAdd
BLAST
Transmembranei136 – 15520HelicalSequence analysisAdd
BLAST
Transmembranei167 – 18923HelicalSequence analysisAdd
BLAST
Transmembranei209 – 23325HelicalSequence analysisAdd
BLAST
Transmembranei245 – 26925HelicalSequence analysisAdd
BLAST
Transmembranei275 – 29420HelicalSequence analysisAdd
BLAST
Transmembranei301 – 32020HelicalSequence analysisAdd
BLAST
Transmembranei326 – 34722HelicalSequence analysisAdd
BLAST
Transmembranei368 – 39023HelicalSequence analysisAdd
BLAST
Transmembranei405 – 42925HelicalSequence analysisAdd
BLAST
Transmembranei441 – 46424HelicalSequence analysisAdd
BLAST
Transmembranei498 – 52326HelicalSequence analysisAdd
BLAST
Transmembranei535 – 55319HelicalSequence analysisAdd
BLAST
Transmembranei573 – 59422HelicalSequence analysisAdd
BLAST
Transmembranei601 – 61818HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionUniRule annotationImported

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini62 – 11857Proton_antipo_NInterPro annotationAdd
BLAST
Domaini130 – 414285Proton_antipo_MInterPro annotationAdd
BLAST

Sequence similaritiesi

Belongs to the complex I subunit 5 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiIPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZY28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLIILLFPL ISLFVISINL NFLGIRGFLY LSTFSLAVSL LLAHVILYDV
60 70 80 90 100
LILGIFTTVD LGEWIYFYEL GSYFTFTFDV VSSIFIYVVL FISFLVHSYS
110 120 130 140 150
IFYISQDPYS SRFILYLNLF TWFILVLVVS ENALTLFLGW EGIGITSYLL
160 170 180 190 200
INFWYSKLQS GKSAIKAVFL NRIGDSFFLI ALGLTFYLFG SDDLFLISSL
210 220 230 240 250
SVFYEKQIVK YLIIAYLIAS IAKSAQILLH VWLPDAIEAP TPVSSLLHAA
260 270 280 290 300
TLVGAGVYLL IKLSFLSLLD FDSSNFIIVI GILTSFLAGL IGFNQFDTKR
310 320 330 340 350
IIAYSTCSQI GLMFYAIGLI SLDFSYLHFV IHGVFKCLMF LLAGAFIHTI
360 370 380 390 400
FNEQDIRKYG SLNFLNSFLS LAFVLSNLSL LGIFFIAGFY SKELLLISGI
410 420 430 440 450
YYNNFWSLLS VLAIFTTCLY GIKSILLVLS GSPNWNSFFS ITIYDTNLIV
460 470 480 490 500
IIILSVLVIL NTFFGPMITE QIKLMDIVYN KSVFFSIKSN LFLFEHVYVN
510 520 530 540 550
WIILFVISVF LILSWNYSIF FFSEKSLSFI NLKKIPMLFF YNRGGFDAIY
560 570 580 590 600
QIISYKIFDF SYRVNWLAND KGYLPLFIFY FPKSVFSVVT NFNLIMQHGL
610
ISIYYISIFS GLLFFILFI
Length:619
Mass (Da):70,911
Last modified:May 1, 1999 - v1
Checksum:iA5067A33C6113903
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF116775 Genomic DNA. Translation: AAD19666.1.
PIRiT11314.
RefSeqiNP_050057.1. NC_000892.1.

Genome annotation databases

GeneIDi800412.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF116775 Genomic DNA. Translation: AAD19666.1.
PIRiT11314.
RefSeqiNP_050057.1. NC_000892.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi800412.

Family and domain databases

InterProiIPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "The complete mitochondrial DNA sequences of Nephroselmis olivacea and Pedinomonas minor: two radically different evolutionary patterns within the green algae."
    Turmel M., Lemieux C., Burger G., Lang B.F., Otis C., Plante I., Gray M.W.
    Plant Cell 11:1717-1730(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: UTEX LB 1350Imported.

Entry informationi

Entry nameiQ9ZY28_PEDMN
AccessioniPrimary (citable) accession number: Q9ZY28
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: April 13, 2016
This is version 72 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.