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Protein

NADH-ubiquinone oxidoreductase chain 5

Gene

nad5

Organism
Pedinomonas minor (Green alga)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

NADH + ubiquinone + 5 H+(In) = NAD+ + ubiquinol + 4 H+(Out).UniRule annotation

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

OxidoreductaseUniRule annotationImported

Keywords - Ligandi

NADUniRule annotation, UbiquinoneUniRule annotation

Names & Taxonomyi

Protein namesi
Recommended name:
NADH-ubiquinone oxidoreductase chain 5UniRule annotation (EC:1.6.5.3UniRule annotation)
Gene namesi
Name:nad5Imported
Encoded oniMitochondrionImported
OrganismiPedinomonas minor (Green alga)Imported
Taxonomic identifieri3159 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeChlorophytaPedinophyceaePedinomonadalesPedinomonadaceaePedinomonas

Subcellular locationi

  • Mitochondrion inner membrane UniRule annotation; Multi-pass membrane protein UniRule annotation

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transmembranei6 – 24HelicalSequence analysisAdd BLAST19
Transmembranei36 – 56HelicalSequence analysisAdd BLAST21
Transmembranei76 – 101HelicalSequence analysisAdd BLAST26
Transmembranei113 – 130HelicalSequence analysisAdd BLAST18
Transmembranei136 – 155HelicalSequence analysisAdd BLAST20
Transmembranei167 – 189HelicalSequence analysisAdd BLAST23
Transmembranei209 – 233HelicalSequence analysisAdd BLAST25
Transmembranei245 – 269HelicalSequence analysisAdd BLAST25
Transmembranei275 – 294HelicalSequence analysisAdd BLAST20
Transmembranei301 – 320HelicalSequence analysisAdd BLAST20
Transmembranei326 – 347HelicalSequence analysisAdd BLAST22
Transmembranei368 – 390HelicalSequence analysisAdd BLAST23
Transmembranei405 – 429HelicalSequence analysisAdd BLAST25
Transmembranei441 – 464HelicalSequence analysisAdd BLAST24
Transmembranei498 – 523HelicalSequence analysisAdd BLAST26
Transmembranei535 – 553HelicalSequence analysisAdd BLAST19
Transmembranei573 – 594HelicalSequence analysisAdd BLAST22
Transmembranei601 – 618HelicalSequence analysisAdd BLAST18

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

Membrane, MitochondrionUniRule annotationImported

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini62 – 118Proton_antipo_NInterPro annotationAdd BLAST57
Domaini130 – 414Proton_antipo_MInterPro annotationAdd BLAST285

Sequence similaritiesi

Belongs to the complex I subunit 5 family.UniRule annotation

Keywords - Domaini

Transmembrane, Transmembrane helixSequence analysis

Family and domain databases

InterProiIPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZY28-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MYLIILLFPL ISLFVISINL NFLGIRGFLY LSTFSLAVSL LLAHVILYDV
60 70 80 90 100
LILGIFTTVD LGEWIYFYEL GSYFTFTFDV VSSIFIYVVL FISFLVHSYS
110 120 130 140 150
IFYISQDPYS SRFILYLNLF TWFILVLVVS ENALTLFLGW EGIGITSYLL
160 170 180 190 200
INFWYSKLQS GKSAIKAVFL NRIGDSFFLI ALGLTFYLFG SDDLFLISSL
210 220 230 240 250
SVFYEKQIVK YLIIAYLIAS IAKSAQILLH VWLPDAIEAP TPVSSLLHAA
260 270 280 290 300
TLVGAGVYLL IKLSFLSLLD FDSSNFIIVI GILTSFLAGL IGFNQFDTKR
310 320 330 340 350
IIAYSTCSQI GLMFYAIGLI SLDFSYLHFV IHGVFKCLMF LLAGAFIHTI
360 370 380 390 400
FNEQDIRKYG SLNFLNSFLS LAFVLSNLSL LGIFFIAGFY SKELLLISGI
410 420 430 440 450
YYNNFWSLLS VLAIFTTCLY GIKSILLVLS GSPNWNSFFS ITIYDTNLIV
460 470 480 490 500
IIILSVLVIL NTFFGPMITE QIKLMDIVYN KSVFFSIKSN LFLFEHVYVN
510 520 530 540 550
WIILFVISVF LILSWNYSIF FFSEKSLSFI NLKKIPMLFF YNRGGFDAIY
560 570 580 590 600
QIISYKIFDF SYRVNWLAND KGYLPLFIFY FPKSVFSVVT NFNLIMQHGL
610
ISIYYISIFS GLLFFILFI
Length:619
Mass (Da):70,911
Last modified:May 1, 1999 - v1
Checksum:iA5067A33C6113903
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF116775 Genomic DNA. Translation: AAD19666.1.
PIRiT11314.
RefSeqiNP_050057.1. NC_000892.1.

Genome annotation databases

GeneIDi800412.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF116775 Genomic DNA. Translation: AAD19666.1.
PIRiT11314.
RefSeqiNP_050057.1. NC_000892.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi800412.

Family and domain databases

InterProiIPR001750. ND/Mrp_mem.
IPR001516. Proton_antipo_N.
[Graphical view]
PfamiPF00361. Proton_antipo_M. 1 hit.
PF00662. Proton_antipo_N. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9ZY28_PEDMN
AccessioniPrimary (citable) accession number: Q9ZY28
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: November 2, 2016
This is version 74 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.