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Protein

KIN17-like protein

Gene

KIN17

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Promotes the copper deficiency response by direct interaction with SPL7. Acts with SPL7 in a common pathway to promote copper-responsive genes and alleviate oxidative stress during copper-limiting periods. May promote SPL7 function when copper is limiting (PubMed:24335506). Participates in the control of general plant growth and development, and in the response to counteract the negative effects of UV radiation (PubMed:24713636).2 Publications

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri28 – 50C2H2-typeSequence analysisAdd BLAST23

GO - Molecular functioni

GO - Biological processi

Keywordsi

Biological processStress response
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Recommended name:
KIN17-like proteinCurated
Gene namesi
Name:KIN171 Publication
Ordered Locus Names:At1g55460Imported
ORF Names:T5A14.13Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRilocus:2193859. AT1G55460.

Subcellular locationi

  • Nucleus speckle 1 Publication

  • Note: Nuclear localization with a speckled distribution pattern.1 Publication

GO - Cellular componenti

Keywords - Cellular componenti

Nucleus

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00004388041 – 411KIN17-like proteinAdd BLAST411

Expressioni

Tissue specificityi

Expressed in root vasculature, lateral roots, cotyledons, rosette leaves, cauline leaves, stems, sepals, style of pistils, mature pollen grains and siliques.1 Publication

Interactioni

Subunit structurei

Interacts with SPL7.1 Publication

Protein-protein interaction databases

IntActiQ9ZVU5. 1 interactor.
STRINGi3702.AT1G55460.1.

Structurei

3D structure databases

SMRiQ9ZVU5.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni51 – 160Winged helix-turn-helix (wHTH)By similarityAdd BLAST110
Regioni301 – 352C-terminal subdomain ABy similarityAdd BLAST52
Regioni358 – 409C-terminal subdomain BBy similarityAdd BLAST52

Coiled coil

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Coiled coili147 – 183Sequence analysisAdd BLAST37
Coiled coili265 – 294Sequence analysisAdd BLAST30

Motif

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Motifi259 – 262Nuclear localization signal (NLS)1 Publication4

Sequence similaritiesi

Belongs to the KIN17 family.Curated

Zinc finger

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Zinc fingeri28 – 50C2H2-typeSequence analysisAdd BLAST23

Keywords - Domaini

Coiled coil, Zinc-finger

Phylogenomic databases

eggNOGiKOG2837. Eukaryota.
ENOG410XRJ7. LUCA.
HOGENOMiHOG000178663.
KOiK13102.
OMAiCHISSES.
OrthoDBiEOG09360EWK.
PhylomeDBiQ9ZVU5.

Family and domain databases

InterProiView protein in InterPro
IPR019447. DNA/RNA-bd_Kin17_cons_domain.
PfamiView protein in Pfam
PF10357. Kin17_mid. 1 hit.
SMARTiView protein in SMART
SM01253. Kin17_mid. 1 hit.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZVU5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKNDFLTPK AIANRIKAKG LQKLRWYCQM CQKQCRDENG FKCHCMSESH
60 70 80 90 100
QRQMQVFGQN PTRVVDGYSE EFEQTFLDLM RRSHRFSRIA ATVVYNEYIN
110 120 130 140 150
DRHHVHMNST EWATLTEFIK HLGKTGKCKV EETPKGWFIT YIDRDSETLF
160 170 180 190 200
KERLKNKRVK SDLAEEEKQE REIQRQIERA AEKLNGGGGE GETSGNDEVV
210 220 230 240 250
DDGDDERKKD EDLRLKSGVK VGFALGGGVK QVATGKERGE SSKLLFGDEE
260 270 280 290 300
NDKVERGEKR KRSGDSGRSE KERRSALDEL MKEEEKKKER MNRKDYWLFE
310 320 330 340 350
GIIVKVMSKA LAEKGYYKQK GVVKKVIDNY VGEIKMLDSK HVLRVDQKEL
360 370 380 390 400
ETVLPQIGGM VKIVNGAYRG SNARLLGVDT EKFCAKVQIE KGVYDGRVIK
410
SIEYEDICKL A
Length:411
Mass (Da):47,288
Last modified:May 1, 1999 - v1
Checksum:i9DA6F8648002065D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005223 Genomic DNA. Translation: AAD10649.1.
CP002684 Genomic DNA. Translation: AEE33248.1.
AF360132 mRNA. Translation: AAK25842.1.
AY051011 mRNA. Translation: AAK93688.1.
PIRiH96596.
RefSeqiNP_564690.1. NM_104422.2.
UniGeneiAt.19003.

Genome annotation databases

EnsemblPlantsiAT1G55460.1; AT1G55460.1; AT1G55460.
GeneIDi841993.
GrameneiAT1G55460.1; AT1G55460.1; AT1G55460.
KEGGiath:AT1G55460.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005223 Genomic DNA. Translation: AAD10649.1.
CP002684 Genomic DNA. Translation: AEE33248.1.
AF360132 mRNA. Translation: AAK25842.1.
AY051011 mRNA. Translation: AAK93688.1.
PIRiH96596.
RefSeqiNP_564690.1. NM_104422.2.
UniGeneiAt.19003.

3D structure databases

SMRiQ9ZVU5.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiQ9ZVU5. 1 interactor.
STRINGi3702.AT1G55460.1.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G55460.1; AT1G55460.1; AT1G55460.
GeneIDi841993.
GrameneiAT1G55460.1; AT1G55460.1; AT1G55460.
KEGGiath:AT1G55460.

Organism-specific databases

AraportiAT1G55460.
TAIRilocus:2193859. AT1G55460.

Phylogenomic databases

eggNOGiKOG2837. Eukaryota.
ENOG410XRJ7. LUCA.
HOGENOMiHOG000178663.
KOiK13102.
OMAiCHISSES.
OrthoDBiEOG09360EWK.
PhylomeDBiQ9ZVU5.

Family and domain databases

InterProiView protein in InterPro
IPR019447. DNA/RNA-bd_Kin17_cons_domain.
PfamiView protein in Pfam
PF10357. Kin17_mid. 1 hit.
SMARTiView protein in SMART
SM01253. Kin17_mid. 1 hit.
PROSITEiView protein in PROSITE
PS00028. ZINC_FINGER_C2H2_1. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiKIN17_ARATH
AccessioniPrimary (citable) accession number: Q9ZVU5
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 18, 2017
Last sequence update: May 1, 1999
Last modified: February 15, 2017
This is version 125 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Miscellaneous

Plants silencing KIN17 show aberrant growth and reduced fertility.1 Publication

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.