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Q9ZUP5 (Q9ZUP5_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified January 25, 2012. Version 65. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Putative beta-1,3-glucanase EMBL AAD10143.1
Gene names
Ordered Locus Names:At2g19440 TAIR At2g19440
ORF Names:AT2G19440 EMBL AEC06881.1
OrganismArabidopsis thaliana (Mouse-ear cress) EMBL AAD10143.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length478 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 17 family. RuleBase RU004335

Sequences

Sequence LengthMass (Da)Tools
Q9ZUP5 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 37354D6E74C9875C

FASTA47852,014
        10         20         30         40         50         60 
MNLLAFVVGF GIMGIVMVDG LGVNWGTMAT HKLPPKKVVQ MLKDNNINKV KLFDADETTM 

        70         80         90        100        110        120 
SALSGSGLEV MVAIPNDQLK VMGSYDRAKD WVHKNVTRYN FNGGVNITFV AVGNEPFLKS 

       130        140        150        160        170        180 
YNGSFINLTF PALQNIQNAL NEAGLGSSVK ATVPLNADVY DSPSSNPVPS AGRFRPDIIG 

       190        200        210        220        230        240 
QMTQIVDFLG NNSAPITINI YPFLSLYGND DFPLNYAFFD GAKPVDDNGI AYTNVFDANF 

       250        260        270        280        290        300 
DTLVSALKAV GHGDMPIIVG EVGWPTEGDK HANSGSAYRF YNGLLPRLGE NRGTPLRPTY 

       310        320        330        340        350        360 
IEVYLFGLLD EDAKSIAPGE FERHWGIFKF DGQPKFPIDL SGQGQNKLLI GAENVTYQPK 

       370        380        390        400        410        420 
KWCMFNTEAK DLTKLAANID YACTFSDCTA LGYGSSCNTL DANGNASYAF NMYFQVKNQD 

       430        440        450        460        470 
EDACIFQGLA TITTKNISQG QCNFPIQIVA STASSFSSSL VLLIAGVWFL LSGVMFEV 

« Hide

References

« Hide 'large scale' references
[1]"Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana."
Lin X., Kaul S., Rounsley S.D., Shea T.P., Benito M.-I., Town C.D., Fujii C.Y., Mason T.M., Bowman C.L., Barnstead M.E., Feldblyum T.V., Buell C.R., Ketchum K.A., Lee J.J., Ronning C.M., Koo H.L., Moffat K.S., Cronin L.A. expand/collapse author list , Shen M., Pai G., Van Aken S., Umayam L., Tallon L.J., Gill J.E., Adams M.D., Carrera A.J., Creasy T.H., Goodman H.M., Somerville C.R., Copenhaver G.P., Preuss D., Nierman W.C., White O., Eisen J.A., Salzberg S.L., Fraser C.M., Venter J.C.
Nature 402:761-768(1999) [PubMed: 10617197] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[2]TAIR
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]Town C.D., Kaul S.
Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]Rounsley S.D., Lin X., Ketchum K.A., Crosby M.L., Brandon R.C., Sykes S.M., Kaul S., Mason T.M., Kerlavage A.R., Adams M.D., Somerville C.R., Venter J.C.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Lin X., Kaul S., Shea T.P., Fujii C.Y., Shen M., VanAken S.E., Barnstead M.E., Mason T.M., Bowman C.L., Ronning C.M., Benito M.-I., Carrera A.J., Creasy T.H., Buell C.R., Town C.D., Nierman W.C., Fraser C.M., Venter J.C.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC005917 Genomic DNA. Translation: AAD10143.1.
AC003058 Genomic DNA. Translation: AAM14870.1.
CP002685 Genomic DNA. Translation: AEC06881.1.
IPIIPI00519762.
PIRG84576.
T01292.
RefSeqNP_179534.1. NM_127502.1.
UniGeneAt.52832.

3D structure databases

HSSPHSSP built from PDB template 1AQ0 based on UniProtKB P12257.
ProteinModelPortalQ9ZUP5.
SMRQ9ZUP5. Positions 21-340, 354-447.
ModBaseSearch...

Protein family/group databases

CAZyCBM43. Carbohydrate-Binding Module Family 43.
GH17. Glycoside Hydrolase Family 17.

Proteomic databases

PRIDEQ9ZUP5.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT2G19440.1; AT2G19440.1; AT2G19440.
GeneID816463.
GenomeReviewsGene locus AT2G19440 in contig CT485783_GR.
KEGGath:AT2G19440.
NMPDRfig|3702.1.peg.8938.

Organism-specific databases

TAIRAt2g19440.

Phylogenomic databases

GeneTreeEPGT00050000009360.
HOGENOMHBG605194.
InParanoidQ9ZUP5.
OMANANIGNA.
PhylomeDBQ9ZUP5.
ProtClustDBCLSN2914646.

Gene expression databases

ArrayExpressQ9ZUP5.
GenevestigatorQ9ZUP5.

Family and domain databases

InterProIPR000490. Glyco_hydro_17.
IPR013781. Glyco_hydro_subgr_catalytic.
IPR017853. Glycoside_hydrolase_SF.
IPR012946. X8.
[Graphical view]
Gene3DG3DSA:3.20.20.80. Glyco_hydro_cat. 1 hit.
PfamPF00332. Glyco_hydro_17. 1 hit.
PF07983. X8. 1 hit.
[Graphical view]
SMARTSM00768. X8. 1 hit.
[Graphical view]
SUPFAMSSF51445. Glyco_hydro_cat. 1 hit.
PROSITEPS00587. GLYCOSYL_HYDROL_F17. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameQ9ZUP5_ARATH
AccessionPrimary (citable) accession number: Q9ZUP5
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: January 25, 2012
This is version 65 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)