Unreviewed,
UniProtKB/TrEMBL Q9ZUI9 (Q9ZUI9_ARATH)
Last modified
April 14, 2009.
Version 47.
History...
Clusters with 100%,
90%,
50% identity |
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Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Binary interactions · Sequences · References · Cross-references · Entry information
Names and origin
| Protein names | Submitted name: T2K10.9 protein EMBL AAD14480.1 | ||||
| Gene names |
| ||||
| Organism | Arabidopsis thaliana (Mouse-ear cress) [Complete proteome] | ||||
| Taxonomic identifier | 3702 [NCBI] | ||||
| Taxonomic lineage | Eukaryota › Viridiplantae › Streptophyta › Embryophyta › Tracheophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › eurosids II › Brassicales › Brassicaceae › Arabidopsis |
Protein attributes
| Sequence length | 284 AA. |
| Sequence status | Complete. |
| Sequence processing | The displayed sequence is not processed. |
| Protein existence | Evidence at protein level. |
General annotation (Comments)
| Subcellular location | Nucleus By similarity. RuleBase RU000476V3 |
| Sequence similarities | Contains 1 MADS-box domain. RuleBase RU000476V3 Spearmint SPM002100 |
Ontologies
| Keywords | |
|---|---|
| Biological process | Transcription Transcription regulation RuleBase RU000476V3 Spearmint SPM002100 |
| Cellular component | Nucleus RuleBase RU000476V3 Spearmint SPM002100 |
| Ligand | DNA-binding RuleBase RU000476V3 Spearmint SPM002100 |
| Technical term | Complete proteome |
| Gene Ontology (GO) | |
| Biological process | regulation of transcription, DNA-dependent Inferred from electronic annotation. Source: InterPro |
| Cellular component | nucleus Inferred from electronic annotation. Source: InterPro |
| Molecular function | protein binding Inferred from physical interaction. Source: IntAct sequence-specific DNA bindingInferred from electronic annotation. Source: InterPro transcription factor activityInferred from electronic annotation. Source: InterPro |
| Complete GO annotation... | |
Binary interactions
With | Entry | #Exp. | IntAct | Notes |
|---|---|---|---|---|
| Q2V412 | 1 | EBI-622185,EBI-1238781 | ||
| CALM | P62157 | 1 | EBI-622185,EBI-397403 | From a different organism. |
| CAM1 | P25854 | 1 | EBI-622185,EBI-1235664 | |
| CAM6 | Q03509 | 1 | EBI-622185,EBI-1236097 | |
| CAM7 | P59220 | 1 | EBI-622185,EBI-1236031 | |
| CML10 | P30187 | 1 | EBI-622185,EBI-1238722 | |
| CML9 | Q9S744 | 1 | EBI-622185,EBI-1236048 |
Sequences
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References
| [1] | "Arabidopsis thaliana chromosome 1 BAC T2K10 sequence." Vysotskaia V.S., Schwartz J.R., Yu G., Toriumi M., Lenz C., Liu S., Li J., Kremenetskaia I., Luros J., Gonzalez A., Altafi H., Araujo R., Buehler E., Chao Q., Conn L., Conway A.B., Dunn P., Hansen N. Theologis A.Submitted (JAN-2001) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. |
Cross-references
Sequence databases | |
|---|---|
| AC005966 Genomic DNA. Translation: AAD14480.1. | |
| IPI | IPI00541612. |
| PIR | G96624. |
| RefSeq | NP_176212.1. |
| UniGene | At.64872 |
3D structure databases | |
| ModBase | Search... |
Protein-protein interaction databases | |
| IntAct | Q9ZUI9. 10 interactions. |
Proteomic databases | |
| PRIDE | Q9ZUI9. |
Genome annotation databases | |
| GeneID | 842298. |
| GenomeReviews | Gene locus AT1G60040 in contig CT485782_GR. |
| KEGG | ath:AT1G60040. |
| NMPDR | fig|3702.1.peg.5395. |
Organism-specific databases | |
| TAIR | At1g60040. |
Family and domain databases | |
| InterPro | IPR002100. TF_MADSbox. [Graphical view] |
| Pfam | PF00319. SRF-TF. 1 hit. [Graphical view] |
| SMART | SM00432. MADS. 1 hit. [Graphical view] |
| PROSITE | PS50066. MADS_BOX_2. 1 hit. [Graphical view] |
| ProtoNet | Search... |
Entry information
| Entry name | Q9ZUI9_ARATH | ||||||||
| Accession | Primary (citable) accession number: Q9ZUI9 | ||||||||
| Entry history |
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| Entry status | Unreviewed (UniProtKB/TrEMBL) | ||||||||

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