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Protein

Beta-glucosidase 4

Gene

BGLU4

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at transcript leveli

Functioni

Catalytic activityi

Hydrolysis of terminal, non-reducing beta-D-glucosyl residues with release of beta-D-glucose.

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei43 – 431SubstrateBy similarity
Binding sitei140 – 1401SubstrateBy similarity
Binding sitei185 – 1851SubstrateBy similarity
Active sitei186 – 1861Proton donorBy similarity
Binding sitei328 – 3281SubstrateBy similarity
Active sitei391 – 3911NucleophileBy similarity
Binding sitei446 – 4461SubstrateBy similarity

GO - Molecular functioni

  1. beta-glucosidase activity Source: UniProtKB-EC

GO - Biological processi

  1. carbohydrate metabolic process Source: InterPro
  2. response to karrikin Source: TAIR
Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Enzyme and pathway databases

BioCyciARA:AT1G60090-MONOMER.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Names & Taxonomyi

Protein namesi
Recommended name:
Beta-glucosidase 4 (EC:3.2.1.21)
Short name:
AtBGLU4
Gene namesi
Name:BGLU4
Ordered Locus Names:At1g60090
ORF Names:T2K10.15
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G60090.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 1717Sequence AnalysisAdd
BLAST
Chaini18 – 512495Beta-glucosidase 4PRO_0000389566Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi205 ↔ 212By similarity
Glycosylationi211 – 2111N-linked (GlcNAc...)Sequence Analysis
Glycosylationi216 – 2161N-linked (GlcNAc...)Sequence Analysis
Glycosylationi436 – 4361N-linked (GlcNAc...)Sequence Analysis
Glycosylationi468 – 4681N-linked (GlcNAc...)Sequence Analysis

Keywords - PTMi

Disulfide bond, Glycoprotein

Proteomic databases

PaxDbiQ9ZUI3.
PRIDEiQ9ZUI3.

Expressioni

Gene expression databases

GenevestigatoriQ9ZUI3.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT1G60090.1-P.

Structurei

3D structure databases

ProteinModelPortaliQ9ZUI3.
SMRiQ9ZUI3. Positions 25-489.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Region

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Regioni453 – 4542Substrate bindingBy similarity

Sequence similaritiesi

Belongs to the glycosyl hydrolase 1 family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ9ZUI3.
OMAiMKQDSQL.
PhylomeDBiQ9ZUI3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9ZUI3-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEQILALFAI FLAFAFSGKC SDVFSRSDYP EGFVFGAGTS AYQWEGAAAE
60 70 80 90 100
DGRKPSLWDT LCHSRDQGNG DIACDGYHKY KDDVKLMVDT NLDAFRFSIS
110 120 130 140 150
WSRLIPNGRG PVNQKGLQFY KNLIQELVSH GIEPHVTLYH YDHPQSLEDE
160 170 180 190 200
YGGWLNHRMI KDFTTYADVC FREFGNHVKL WTTINEANIF SIGGYNDGDT
210 220 230 240 250
PPGRCSKPSK NCSSGNSSIE PYIVGHNLLL AHASVSRRYK QKYKDKQGGS
260 270 280 290 300
IGFSLFILGL IPTTSSKDDA TATQRAQDFY VGWFLRPLLF GDYPDTMKRT
310 320 330 340 350
IGSRLPVFSE KESEQVKGSC DFVGVIHYHA ASVTNIKSKP SLSGNPDFYS
360 370 380 390 400
YMETDFGKSL DFQYANTPWA MEVVLEYIKQ SYGNPPVYIL ESAKFTFQWQ
410 420 430 440 450
QIGTPMKQDS QLKQKDIPRV EYLHAYIGGV LKSIRNGSDT RGYFVWSFMD
460 470 480 490 500
LYELLGGYEV GFGLYTVNFS DPHRKRSPKL SAYWYSDFLK GESAFLDSQG
510
IKELQSKYSS SF
Length:512
Mass (Da):57,971
Last modified:November 24, 2009 - v2
Checksum:i429AC4ACBA52FC98
GO

Sequence cautioni

The sequence AAD14488.1 differs from that shown. Reason: Erroneous gene model prediction. Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005966 Genomic DNA. Translation: AAD14488.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33658.1.
PIRiE96625.
RefSeqiNP_176217.2. NM_104701.2.
UniGeneiAt.52279.

Genome annotation databases

EnsemblPlantsiAT1G60090.1; AT1G60090.1; AT1G60090.
GeneIDi842304.
KEGGiath:AT1G60090.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC005966 Genomic DNA. Translation: AAD14488.1. Sequence problems.
CP002684 Genomic DNA. Translation: AEE33658.1.
PIRiE96625.
RefSeqiNP_176217.2. NM_104701.2.
UniGeneiAt.52279.

3D structure databases

ProteinModelPortaliQ9ZUI3.
SMRiQ9ZUI3. Positions 25-489.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT1G60090.1-P.

Protein family/group databases

CAZyiGH1. Glycoside Hydrolase Family 1.

Proteomic databases

PaxDbiQ9ZUI3.
PRIDEiQ9ZUI3.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G60090.1; AT1G60090.1; AT1G60090.
GeneIDi842304.
KEGGiath:AT1G60090.

Organism-specific databases

TAIRiAT1G60090.

Phylogenomic databases

eggNOGiCOG2723.
HOGENOMiHOG000088630.
InParanoidiQ9ZUI3.
OMAiMKQDSQL.
PhylomeDBiQ9ZUI3.

Enzyme and pathway databases

BioCyciARA:AT1G60090-MONOMER.

Miscellaneous databases

PROiQ9ZUI3.

Gene expression databases

GenevestigatoriQ9ZUI3.

Family and domain databases

Gene3Di3.20.20.80. 1 hit.
InterProiIPR001360. Glyco_hydro_1.
IPR018120. Glyco_hydro_1_AS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERiPTHR10353. PTHR10353. 1 hit.
PfamiPF00232. Glyco_hydro_1. 1 hit.
[Graphical view]
PRINTSiPR00131. GLHYDRLASE1.
SUPFAMiSSF51445. SSF51445. 1 hit.
PROSITEiPS00653. GLYCOSYL_HYDROL_F1_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana."
    Theologis A., Ecker J.R., Palm C.J., Federspiel N.A., Kaul S., White O., Alonso J., Altafi H., Araujo R., Bowman C.L., Brooks S.Y., Buehler E., Chan A., Chao Q., Chen H., Cheuk R.F., Chin C.W., Chung M.K.
    , Conn L., Conway A.B., Conway A.R., Creasy T.H., Dewar K., Dunn P., Etgu P., Feldblyum T.V., Feng J.-D., Fong B., Fujii C.Y., Gill J.E., Goldsmith A.D., Haas B., Hansen N.F., Hughes B., Huizar L., Hunter J.L., Jenkins J., Johnson-Hopson C., Khan S., Khaykin E., Kim C.J., Koo H.L., Kremenetskaia I., Kurtz D.B., Kwan A., Lam B., Langin-Hooper S., Lee A., Lee J.M., Lenz C.A., Li J.H., Li Y.-P., Lin X., Liu S.X., Liu Z.A., Luros J.S., Maiti R., Marziali A., Militscher J., Miranda M., Nguyen M., Nierman W.C., Osborne B.I., Pai G., Peterson J., Pham P.K., Rizzo M., Rooney T., Rowley D., Sakano H., Salzberg S.L., Schwartz J.R., Shinn P., Southwick A.M., Sun H., Tallon L.J., Tambunga G., Toriumi M.J., Town C.D., Utterback T., Van Aken S., Vaysberg M., Vysotskaia V.S., Walker M., Wu D., Yu G., Fraser C.M., Venter J.C., Davis R.W.
    Nature 408:816-820(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. Columbia.
  2. The Arabidopsis Information Resource (TAIR)
    Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. Columbia.
  3. Cited for: GENE FAMILY, NOMENCLATURE.

Entry informationi

Entry nameiBGL04_ARATH
AccessioniPrimary (citable) accession number: Q9ZUI3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 24, 2009
Last sequence update: November 24, 2009
Last modified: April 29, 2015
This is version 80 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.