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Q9ZSJ7 (Q9ZSJ7_ARATH) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 80. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Genomic DNA, chromosome 3, P1 clone:MUJ8 EMBL BAB01357.1

Putative type 1 membrane protein EMBL AAD11797.1

Type 1 membrane protein, putative EMBL AAM61580.1
Gene names
Name:PMP EMBL AAD11797.1
Ordered Locus Names:At3g24160 EMBL AEE76864.1 TAIR AT3G24160
OrganismArabidopsis thaliana (Mouse-ear cress) [Reference proteome] EMBL AAD11797.1
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis

Protein attributes

Sequence length364 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
Q9ZSJ7 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 9A5CBC8CFD73D3A9

FASTA36439,134
        10         20         30         40         50         60 
MKAFYVFVVA LLLTLNYRGE ASGSVFFIDG SNNQYLRPRS SSEALPMSPV EISAAVSALL 

        70         80         90        100        110        120 
GFAPSATLTA DGSSKLNKIL KPNPFERPRA AFVLEIAGAD DMLLETSPSH SFLGNAIRSS 

       130        140        150        160        170        180 
IKSDSYKADT ELPDNEVVVV SVNEPSSDVT DKDINDFASW LGGSYVAGAE PSSGLLSIPL 

       190        200        210        220        230        240 
AGGANVEFNL EKEAERKFAL NLLGLYQNIR QAVSVYDDLS HGIDRTAELT VGRFGGIDAL 

       250        260        270        280        290        300 
AQEYGQGMAK QGMDVLLSTL SKLFNLLETS HKGQIVGVIV LDERVNQESE NLLNFGSSRS 

       310        320        330        340        350        360 
SARSMVEVEG IPSAAIIAEV ILVRLTLAWL TGIILLIATI LGVYFLMNMP LTKDTLLYSN 


VKLD 

« Hide

References

« Hide 'large scale' references
[1]"Selection of Arabidopsis genes encoding secreted and plasma membrane proteins."
Goo J.H., Park A.R., Park W.J., Park O.K.
Plant Mol. Biol. 41:415-423(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[2]"Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
Nakamura Y.
DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[3]"Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F. expand/collapse author list , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: cv. Columbia.
[4]"Arabidopsis cDNA clones."
Shinn P., Chen H., Cheuk R., Kim C.J., Koesema E., Meyers M.C., Banh J., Bowser L., Carninci P., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jiang P.X., Jones T., Kamiya A., Karlin-Neumann G., Kawai J. expand/collapse author list , Lam B., Lee J.M., Lin J., Liu S.X., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Pham P.K., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (AUG-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Full-length messenger RNA sequences greatly improve genome annotation."
Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[6]Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[7]"Arabidopsis ORF clones."
Cheuk R., Chen H., Kim C.J., Shinn P., Banh J., Bowser L., Carninci P., Chang E., Dale J.M., Goldsmith A.D., Hayashizaki Y., Ishida J., Jones T., Kamiya A., Karlin-Neumann G., Kawai J., Lam B., Lee J.M. expand/collapse author list , Lin J., Miranda M., Narusaka M., Nguyen M., Onodera C.S., Palm C.J., Quach H.L., Sakurai T., Satou M., Seki M., Southwick A., Tang C.C., Toriumi M., Wu H.C., Yamada K., Yamamura Y., Yu G., Yu S., Shinozaki K., Davis R.W., Theologis A., Ecker J.R.
Submitted (JUL-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]"Features of Arabidopsis genes and genome discovered using full-length cDNAs."
Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
Plant Mol. Biol. 60:71-87(2006)
Cited for: NUCLEOTIDE SEQUENCE.
[9]TAIR
Swarbreck D., Lamesch P., Wilks C., Huala E.
Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[10]The Arabidopsis Information Resource (TAIR)
Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
Cited for: GENOME REANNOTATION.
Strain: cv. Columbia.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF104329 mRNA. Translation: AAD11797.1.
AY053413 mRNA. Translation: AAK96643.1.
AY085022 mRNA. Translation: AAM61580.1.
AY133587 mRNA. Translation: AAM91417.1.
CP002686 Genomic DNA. Translation: AEE76864.1.
AB028621 Genomic DNA. Translation: BAB01357.1.
PIRT52336.
RefSeqNP_189058.1. NM_113321.4.
UniGeneAt.20418.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

STRING3702.AT3G24160.1-P.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsAT3G24160.1; AT3G24160.1; AT3G24160.
GeneID822002.
KEGGath:AT3G24160.

Organism-specific databases

TAIRAT3G24160.

Phylogenomic databases

eggNOGNOG290973.
HOGENOMHOG000029185.
InParanoidQ9ZSJ7.
OMARKSLAWI.
PhylomeDBQ9ZSJ7.

Gene expression databases

GenevestigatorQ9ZSJ7.

Family and domain databases

ProtoNetSearch...

Entry information

Entry nameQ9ZSJ7_ARATH
AccessionPrimary (citable) accession number: Q9ZSJ7
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 9, 2014
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)