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Q9ZSJ7

- Q9ZSJ7_ARATH

UniProt

Q9ZSJ7 - Q9ZSJ7_ARATH

Protein
Submitted name:

AT3g24160/MUJ8_16

Gene

PMP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 82 (01 Oct 2014)
      Sequence version 1 (01 May 1999)
      Previous versions | rss
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    Names & Taxonomyi

    Protein namesi
    Submitted name:
    AT3g24160/MUJ8_16Imported
    Submitted name:
    Genomic DNA, chromosome 3, P1 clone:MUJ8Imported
    Submitted name:
    Putative type 1 membrane proteinImported
    Submitted name:
    Type 1 membrane protein, putativeImported
    Gene namesi
    Name:PMPImported
    Ordered Locus Names:At3g24160Imported
    OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
    Taxonomic identifieri3702 [NCBI]
    Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
    ProteomesiUP000006548: Chromosome 3

    Organism-specific databases

    TAIRiAT3G24160.

    Subcellular locationi

    GO - Cellular componenti

    1. endoplasmic reticulum Source: TAIR
    2. Golgi apparatus Source: TAIR
    3. membrane Source: TAIR
    4. vacuolar membrane Source: TAIR

    Expressioni

    Gene expression databases

    GenevestigatoriQ9ZSJ7.

    Interactioni

    Protein-protein interaction databases

    STRINGi3702.AT3G24160.1-P.

    Family & Domainsi

    Phylogenomic databases

    eggNOGiNOG290973.
    HOGENOMiHOG000029185.
    InParanoidiQ9ZSJ7.
    OMAiRKSLAWI.
    PhylomeDBiQ9ZSJ7.

    Sequencei

    Sequence statusi: Complete.

    Q9ZSJ7-1 [UniParc]FASTAAdd to Basket

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    MKAFYVFVVA LLLTLNYRGE ASGSVFFIDG SNNQYLRPRS SSEALPMSPV    50
    EISAAVSALL GFAPSATLTA DGSSKLNKIL KPNPFERPRA AFVLEIAGAD 100
    DMLLETSPSH SFLGNAIRSS IKSDSYKADT ELPDNEVVVV SVNEPSSDVT 150
    DKDINDFASW LGGSYVAGAE PSSGLLSIPL AGGANVEFNL EKEAERKFAL 200
    NLLGLYQNIR QAVSVYDDLS HGIDRTAELT VGRFGGIDAL AQEYGQGMAK 250
    QGMDVLLSTL SKLFNLLETS HKGQIVGVIV LDERVNQESE NLLNFGSSRS 300
    SARSMVEVEG IPSAAIIAEV ILVRLTLAWL TGIILLIATI LGVYFLMNMP 350
    LTKDTLLYSN VKLD 364
    Length:364
    Mass (Da):39,134
    Last modified:May 1, 1999 - v1
    Checksum:i9A5CBC8CFD73D3A9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF104329 mRNA. Translation: AAD11797.1.
    AY053413 mRNA. Translation: AAK96643.1.
    AY085022 mRNA. Translation: AAM61580.1.
    AY133587 mRNA. Translation: AAM91417.1.
    CP002686 Genomic DNA. Translation: AEE76864.1.
    AB028621 Genomic DNA. Translation: BAB01357.1.
    PIRiT52336.
    RefSeqiNP_189058.1. NM_113321.4.
    UniGeneiAt.20418.

    Genome annotation databases

    EnsemblPlantsiAT3G24160.1; AT3G24160.1; AT3G24160.
    GeneIDi822002.
    KEGGiath:AT3G24160.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AF104329 mRNA. Translation: AAD11797.1 .
    AY053413 mRNA. Translation: AAK96643.1 .
    AY085022 mRNA. Translation: AAM61580.1 .
    AY133587 mRNA. Translation: AAM91417.1 .
    CP002686 Genomic DNA. Translation: AEE76864.1 .
    AB028621 Genomic DNA. Translation: BAB01357.1 .
    PIRi T52336.
    RefSeqi NP_189058.1. NM_113321.4.
    UniGenei At.20418.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    STRINGi 3702.AT3G24160.1-P.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblPlantsi AT3G24160.1 ; AT3G24160.1 ; AT3G24160 .
    GeneIDi 822002.
    KEGGi ath:AT3G24160.

    Organism-specific databases

    TAIRi AT3G24160.

    Phylogenomic databases

    eggNOGi NOG290973.
    HOGENOMi HOG000029185.
    InParanoidi Q9ZSJ7.
    OMAi RKSLAWI.
    PhylomeDBi Q9ZSJ7.

    Gene expression databases

    Genevestigatori Q9ZSJ7.

    Family and domain databases

    ProtoNeti Search...

    Publicationsi

    1. "Selection of Arabidopsis genes encoding secreted and plasma membrane proteins."
      Goo J.H., Park A.R., Park W.J., Park O.K.
      Plant Mol. Biol. 41:415-423(1999) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    2. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
      Nakamura Y.
      DNA Res. 7:131-135(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    3. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
      European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
      Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Bloecker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
      , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schaefer M., Mueller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Loehnert T.-H., Nordsiek G., Reichelt J., Scharfe M., Schoen O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwaelder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.-P., Cottet A., Casacuberta E., Monfort A., Argiriou A., Flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.-W., Mayer K.F.X., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
      Nature 408:820-822(2000) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: cv. ColumbiaImported.
    4. Cited for: NUCLEOTIDE SEQUENCE.
    5. "Full-length messenger RNA sequences greatly improve genome annotation."
      Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
      Genome Biol. 3:RESEARCH0029-RESEARCH0029(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    6. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
      Submitted (MAR-2002) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    7. Cited for: NUCLEOTIDE SEQUENCE.
    8. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
      Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
      Plant Mol. Biol. 60:71-87(2006)
      Cited for: NUCLEOTIDE SEQUENCE.
    9. TAIR
      Swarbreck D., Lamesch P., Wilks C., Huala E.
      Submitted (FEB-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
    10. The Arabidopsis Information Resource (TAIR)
      Submitted (APR-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: GENOME REANNOTATION.
      Strain: cv. ColumbiaImported.

    Entry informationi

    Entry nameiQ9ZSJ7_ARATH
    AccessioniPrimary (citable) accession number: Q9ZSJ7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: May 1, 1999
    Last sequence update: May 1, 1999
    Last modified: October 1, 2014
    This is version 82 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3