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Protein
Submitted name:

AT3g24160/MUJ8_16

Gene

PMP

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Names & Taxonomyi

Protein namesi
Submitted name:
AT3g24160/MUJ8_16Imported
Submitted name:
Genomic DNA, chromosome 3, P1 clone:MUJ8Imported
Submitted name:
Putative type 1 membrane proteinImported
Submitted name:
Type 1 membrane protein, putativeImported
Gene namesi
Name:PMPImported
Ordered Locus Names:At3g24160Imported
OrganismiArabidopsis thaliana (Mouse-ear cress)Imported
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
ProteomesiUP000006548 Componenti: Chromosome 3

Organism-specific databases

TAIRiAT3G24160.

Subcellular locationi

GO - Cellular componenti

  1. endoplasmic reticulum Source: TAIR
  2. Golgi apparatus Source: TAIR
  3. membrane Source: TAIR
  4. vacuolar membrane Source: TAIR
Complete GO annotation...

PTM / Processingi

Proteomic databases

PaxDbiQ9ZSJ7.
PRIDEiQ9ZSJ7.

Expressioni

Gene expression databases

GenevestigatoriQ9ZSJ7.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT3G24160.1-P.

Family & Domainsi

Phylogenomic databases

eggNOGiNOG290973.
HOGENOMiHOG000029185.
InParanoidiQ9ZSJ7.
OMAiGVCLLMN.
PhylomeDBiQ9ZSJ7.

Sequencei

Sequence statusi: Complete.

Q9ZSJ7-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKAFYVFVVA LLLTLNYRGE ASGSVFFIDG SNNQYLRPRS SSEALPMSPV
60 70 80 90 100
EISAAVSALL GFAPSATLTA DGSSKLNKIL KPNPFERPRA AFVLEIAGAD
110 120 130 140 150
DMLLETSPSH SFLGNAIRSS IKSDSYKADT ELPDNEVVVV SVNEPSSDVT
160 170 180 190 200
DKDINDFASW LGGSYVAGAE PSSGLLSIPL AGGANVEFNL EKEAERKFAL
210 220 230 240 250
NLLGLYQNIR QAVSVYDDLS HGIDRTAELT VGRFGGIDAL AQEYGQGMAK
260 270 280 290 300
QGMDVLLSTL SKLFNLLETS HKGQIVGVIV LDERVNQESE NLLNFGSSRS
310 320 330 340 350
SARSMVEVEG IPSAAIIAEV ILVRLTLAWL TGIILLIATI LGVYFLMNMP
360
LTKDTLLYSN VKLD
Length:364
Mass (Da):39,134
Last modified:May 1, 1999 - v1
Checksum:i9A5CBC8CFD73D3A9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF104329 mRNA. Translation: AAD11797.1.
AY053413 mRNA. Translation: AAK96643.1.
AY085022 mRNA. Translation: AAM61580.1.
AY133587 mRNA. Translation: AAM91417.1.
CP002686 Genomic DNA. Translation: AEE76864.1.
AB028621 Genomic DNA. Translation: BAB01357.1.
PIRiT52336.
RefSeqiNP_189058.1. NM_113321.4.
UniGeneiAt.20418.

Genome annotation databases

EnsemblPlantsiAT3G24160.1; AT3G24160.1; AT3G24160.
GeneIDi822002.
KEGGiath:AT3G24160.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF104329 mRNA. Translation: AAD11797.1.
AY053413 mRNA. Translation: AAK96643.1.
AY085022 mRNA. Translation: AAM61580.1.
AY133587 mRNA. Translation: AAM91417.1.
CP002686 Genomic DNA. Translation: AEE76864.1.
AB028621 Genomic DNA. Translation: BAB01357.1.
PIRiT52336.
RefSeqiNP_189058.1. NM_113321.4.
UniGeneiAt.20418.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT3G24160.1-P.

Proteomic databases

PaxDbiQ9ZSJ7.
PRIDEiQ9ZSJ7.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT3G24160.1; AT3G24160.1; AT3G24160.
GeneIDi822002.
KEGGiath:AT3G24160.

Organism-specific databases

TAIRiAT3G24160.

Phylogenomic databases

eggNOGiNOG290973.
HOGENOMiHOG000029185.
InParanoidiQ9ZSJ7.
OMAiGVCLLMN.
PhylomeDBiQ9ZSJ7.

Gene expression databases

GenevestigatoriQ9ZSJ7.

Family and domain databases

ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Selection of Arabidopsis genes encoding secreted and plasma membrane proteins."
    Goo J.H., Park A.R., Park W.J., Park O.K.
    Plant Mol. Biol. 41:415-423(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  2. "Structural analysis of Arabidopsis thaliana chromosome 3. I. Sequence features of the regions of 4,504,864 bp covered by sixty P1 and TAC clones."
    Nakamura Y.
    DNA Res. 7:131-135(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  3. "Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana."
    European Union Chromosome 3 Arabidopsis Sequencing Consortium, Institute for Genomic Research, Kazusa DNA Research Institute
    Salanoubat M., Lemcke K., Rieger M., Ansorge W., Unseld M., Fartmann B., Valle G., Blocker H., Perez-Alonso M., Obermaier B., Delseny M., Boutry M., Grivell L.A., Mache R., Puigdomenech P., De Simone V., Choisne N., Artiguenave F.
    , Robert C., Brottier P., Wincker P., Cattolico L., Weissenbach J., Saurin W., Quetier F., Schafer M., Muller-Auer S., Gabel C., Fuchs M., Benes V., Wurmbach E., Drzonek H., Erfle H., Jordan N., Bangert S., Wiedelmann R., Kranz H., Voss H., Holland R., Brandt P., Nyakatura G., Vezzi A., D'Angelo M., Pallavicini A., Toppo S., Simionati B., Conrad A., Hornischer K., Kauer G., Lohnert T.H., Nordsiek G., Reichelt J., Scharfe M., Schon O., Bargues M., Terol J., Climent J., Navarro P., Collado C., Perez-Perez A., Ottenwalder B., Duchemin D., Cooke R., Laudie M., Berger-Llauro C., Purnelle B., Masuy D., de Haan M., Maarse A.C., Alcaraz J.P., Cottet A., Casacuberta E., Monfort A., Argiriou A., flores M., Liguori R., Vitale D., Mannhaupt G., Haase D., Schoof H., Rudd S., Zaccaria P., Mewes H.W., Mayer K.F., Kaul S., Town C.D., Koo H.L., Tallon L.J., Jenkins J., Rooney T., Rizzo M., Walts A., Utterback T., Fujii C.Y., Shea T.P., Creasy T.H., Haas B., Maiti R., Wu D., Peterson J., Van Aken S., Pai G., Militscher J., Sellers P., Gill J.E., Feldblyum T.V., Preuss D., Lin X., Nierman W.C., Salzberg S.L., White O., Venter J.C., Fraser C.M., Kaneko T., Nakamura Y., Sato S., Kato T., Asamizu E., Sasamoto S., Kimura T., Idesawa K., Kawashima K., Kishida Y., Kiyokawa C., Kohara M., Matsumoto M., Matsuno A., Muraki A., Nakayama S., Nakazaki N., Shinpo S., Takeuchi C., Wada T., Watanabe A., Yamada M., Yasuda M., Tabata S.
    Nature 408:820-822(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: cv. ColumbiaImported.
  4. Cited for: NUCLEOTIDE SEQUENCE.
  5. "Full-length messenger RNA sequences greatly improve genome annotation."
    Haas B.J., Volfovsky N., Town C.D., Troukhan M., Alexandrov N., Feldmann K.A., Flavell R.B., White O., Salzberg S.L.
    Genome Biol. 3:RESEARCH0029-RESEARCH0029(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
  6. Brover V., Troukhan M., Alexandrov N., Lu Y.-P., Flavell R., Feldmann K.
    Submitted (FEB-2002) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  7. Cited for: NUCLEOTIDE SEQUENCE.
  8. "Features of Arabidopsis genes and genome discovered using full-length cDNAs."
    Alexandrov N.A., Troukhan M.E., Brover V.V., Flavell R.B., Feldmann K.A.
    Plant Mol. Biol. 60:71-87(2005)
    Cited for: NUCLEOTIDE SEQUENCE.
  9. TAIR
    Swarbreck D., Lamesch P., Wilks C., Huala E.
    Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
  10. The Arabidopsis Information Resource (TAIR)
    Submitted (MAR-2011) to the EMBL/GenBank/DDBJ databases
    Cited for: GENOME REANNOTATION.
    Strain: cv. ColumbiaImported.

Entry informationi

Entry nameiQ9ZSJ7_ARATH
AccessioniPrimary (citable) accession number: Q9ZSJ7
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: April 1, 2015
This is version 85 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.