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Unreviewed, UniProtKB/TrEMBL Q9ZSJ2 (Q9ZSJ2_ARATH)

Last modified June 16, 2009. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein AT4g01770 EMBL CAB77747.1
Submitted name:
    1,3-alpha-D-xylosyltransferase EMBL DAA05811.1
    Putative uncharacterized protein EMBL AAX23885.1
    Putative uncharacterized protein T7B11.3 EMBL AAD22639.1
    T15B16.8 protein EMBL AAC72867.1
Gene names
Name: RGXT1 EMBL DAA05811.1
Synonyms: AT4g01770 EMBL CAB77747.1, T7B11.3 EMBL AAD22639.1
Ordered Locus Names: At4g01770 TAIR At4g01770
ORF Names: Atg01770 EMBL DAA05811.1, T15B16.8
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length361 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processrhamnogalacturonan II biosynthetic process Ref.4

Inferred from mutant phenotype. Source: TAIR

   Cellular componentGolgi apparatus Ref.4

Inferred from direct assay. Source: TAIR

endoplasmic reticulum

Inferred from electronic annotation. Source: InterPro

   Molecular functionUDP-xylosyltransferase activity Ref.4

Inferred from direct assay. Source: TAIR

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9ZSJ2-1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: DDCAACD4883E6A19

FASTA36141,174
        10         20         30         40         50         60 
MEQKQHILKQ STFSSSPSSY SSISDRPISL LSRNGLLLLL LALVLLLGVL LPWPGSPLFL 

        70         80         90        100        110        120 
FPNRLSSSLS PSPQSKWRDY TLAQAARFVA KNGTVIVCAV SSPFLPFLNN WLISVSRQKH 

       130        140        150        160        170        180 
QDKVLVIAED YITLYKVNEK WPGHAVLIPP ALDSKTAFSF GSQGFFNFTA RRPQHLLQIL 

       190        200        210        220        230        240 
ELGYNVMYND VDMVWLQDPF LYLEGSHDAY FTDDMPQIKP LNHSHDLPHP DRNGETYICS 

       250        260        270        280        290        300 
CMIYLRPTNG AKLLMKKWSE ELQSQAWSES IRFKANDQPA FNLALNKTAH QVDLYLLSQV 

       310        320        330        340        350        360 
AFPTGGLYFK NEAWVQETKG KHVIVHNNYI IGYDRKMKRF QDYGLWLVDD HALESPLGKL 


E 

« Hide

References

[1]"The A. thaliana Genome Sequencing Project."
WashU
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The sequence of A. thaliana T15B16."
Stoneking T., Smith R.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Waterston R.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis thaliana RGXT1 and RGXT2 encode Golgi-localized (1,3)-alpha-D-xylosyltransferases involved in the synthesis of pectic rhamnogalacturonan-II."
Egelund J., Petersen B.L., Motawia M.S., Damager I., Faik A., Olsen C.E., Ishii T., Clausen H., Ulvskov P., Geshi N.
Plant Cell 18:2593-2607(2006) [PubMed: 17056709] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]Underwood B.A., Xiao Y., Moskal W., Monaghan E., Wang W., Redman J., Wu H.C., Utterback T., Town C.D.
Submitted (FEB-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Lamar B., Stoneking T., Stumpf J., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[7]Spiegel L.A., Huang E.N., Nascimento L.U., de la Bastide M., Vil D.M., Preston R.R., Matero A., Shah R., O'Shaughnessy A., Rodriguez M., Shekher M., Schutz K., See L.H., Swaby I., Habermann K., Dedhia N.N., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[9]"Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM."
Huang E.N., Nascimento L., de la Bastide M., Habermann K., Vil M.D., Preston R.R., Spiegel L.A., See L.H., Shah R., Matero A., O'Shaughnessy A., Rodriguez M., Shekher M., Swaby I., Schutz K., Parnell L.D., Dedhia N.N., McCombie W.R.
Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[10]Parnell L.D.
Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AF104919 Genomic DNA. Translation: AAC72867.1.
AC007138 Genomic DNA. Translation: AAD22639.1.
AY924810 mRNA. Translation: AAX23885.1.
AL161492 Genomic DNA. Translation: CAB77747.1.
BK005829 mRNA. Translation: DAA05811.1.
IPIIPI00542928.
PIRT01998.
RefSeqNP_192086.1.
UniGeneAt.50860

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT77. Glycosyltransferase Family 77.

Genome annotation databases

GeneID828129.
KEGGath:AT4G01770.
NMPDRfig|3702.1.peg.17971.

Organism-specific databases

TAIRAt4g01770.

Phylogenomic databases

OMAQ9ZSJ2. HILELGY.

Family and domain databases

InterProIPR003388. Reticulon.
[Graphical view]
PANTHERPTHR10994. Reticulon. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9ZSJ2_ARATH
AccessionPrimary (citable) accession number: Q9ZSJ2
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: June 16, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information