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Unreviewed, UniProtKB/TrEMBL Q9ZSJ0 (Q9ZSJ0_ARATH)

Last modified April 14, 2009. Version 42. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information

Names and origin

Protein namesSubmitted name:
    Putative uncharacterized protein AT4g01750 EMBL CAB77745.1
Submitted name:
    1,3-alpha-D-xylosyltransferase EMBL DAA05812.1
    Putative uncharacterized protein At4g01750 EMBL AAO00918.1
    Putative uncharacterized protein At4g01750; T15B16.9 EMBL AAL38247.1
    Putative uncharacterized protein T7B11.1 EMBL AAD22637.1
    T15B16.9 protein EMBL AAC72859.1
Gene names
Name: RGXT2 EMBL DAA05812.1
Synonyms: AT4g01750 EMBL CAB77745.1, At4g01750/T15B16.9 EMBL AAL38247.1, T7B11.1 EMBL AAD22637.1
Ordered Locus Names: At4g01750 TAIR At4g01750
ORF Names: T15B16.9
OrganismArabidopsis thaliana (Mouse-ear cress) [Complete proteome]
Taxonomic identifier3702 [NCBI]
Taxonomic lineageEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonscore eudicotyledonsrosidseurosids IIBrassicalesBrassicaceaeArabidopsis

Protein attributes

Sequence length367 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at transcript level.

Ontologies

Keywords
   Molecular functionTransferase
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processrhamnogalacturonan II biosynthetic process Ref.4

Inferred from mutant phenotype. Source: TAIR

   Cellular componentGolgi apparatus Ref.4

Inferred from direct assay. Source: TAIR

endoplasmic reticulum

Inferred from electronic annotation. Source: InterPro

   Molecular functionUDP-xylosyltransferase activity Ref.4

Inferred from direct assay. Source: TAIR

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
Q9ZSJ0-1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 081700576D044471

FASTA36741,799
        10         20         30         40         50         60 
MAQKQQTLHQ QRPFSSSPRS YSSISNRPIF LLSRNGLLLV LLALFLLLGV FLPWPGSPLL 

        70         80         90        100        110        120 
LFPNKVSSPS YASSLSPHAK SEWRNYTLAQ AAKFVATNGT VIVCAVSSPF LPFLNNWLIS 

       130        140        150        160        170        180 
VSRQKHQEKV LVIAEDYITL YKVNEKWPGH AVLIPPALDS KTAYSFGSQG FFNFTARRPQ 

       190        200        210        220        230        240 
HLLQILELGY NVMYNDVDMV WLQDPFQYLE GSHDAYFTDD MPQIKPLNHS HDLPAPDQNG 

       250        260        270        280        290        300 
ETYICSCMIY LRPTNGAKLL MKKWSEELQS QAWSESIRFK ANDQPAFNLA LNKTAHQVDL 

       310        320        330        340        350        360 
YLLSQVAFPT GGLYFNDAAW VKETKGKHVI VHNNYIIGYD RKMRRFQDYG LWLVDDHALE 


SPLGKLQ 

« Hide

References

[1]"The A. thaliana Genome Sequencing Project."
WashU
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[2]"The sequence of A. thaliana T15B16."
Stoneking T., Smith R.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[3]Waterston R.
Submitted (NOV-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[4]"Arabidopsis thaliana RGXT1 and RGXT2 encode Golgi-localized (1,3)-alpha-D-xylosyltransferases involved in the synthesis of pectic rhamnogalacturonan-II."
Egelund J., Petersen B.L., Motawia M.S., Damager I., Faik A., Olsen C.E., Ishii T., Clausen H., Ulvskov P., Geshi N.
Plant Cell 18:2593-2607(2006) [PubMed: 17056709] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]Nguyen M., Southwick A., Tripp M., Palm C.J., Jones T., Wu T., Carninci P., Chen H., Cheuk R., Chan M.M., Chang C.H., Dale J.M., Deng J.M., Hayashizaki Y., Hsuan V.W., Lee J.M., Ishida J., Kamiya A. expand/collapse author list , Kawai J., Kim C.J., Narusaka M., Onodera C.S., Quach H.L., Sakurai T., Satou M., Seki M., Shinn P., Tang C.C., Toroumi M., Wong C., Wu H.C., Yamada K., Yu G., Yuan S., Shinozaki K., Ecker J., Theologis A., Davis R.W.
Submitted (DEC-2002) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[6]Nguyen M., Karlin-Neumann G., Southwick A., Lam B., Miranda M., Palm C.J., Bowser L., Jones T., Banh J., Carninci P., Chen H., Cheuk R., Chung M.K., Hayashizaki Y., Ishida J., Kamiya A., Kawai J., Kim C. expand/collapse author list , Lin J., Liu S.X., Narusaka M., Pham P.K., Sakano H., Sakurai T., Satou M., Seki M., Shinn P., Yamada K., Shinozaki K., Ecker J., Theologis A., Davis R.W.
Submitted (DEC-2001) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[7]Lamar B., Stoneking T., Stumpf J., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[8]Spiegel L.A., Huang E.N., Nascimento L.U., de la Bastide M., Vil D.M., Preston R.R., Matero A., Shah R., O'Shaughnessy A., Rodriguez M., Shekher M., Schutz K., See L.H., Swaby I., Habermann K., Dedhia N.N., Mewes H.W., Lemcke K., Mayer K.F.X.
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[9]EU Arabidopsis sequencing project
Submitted (MAR-2000) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[10]"Arabidopsis thaliana BAC T7B11 from chromosome IV near 10 cM."
Huang E.N., Nascimento L., de la Bastide M., Habermann K., Vil M.D., Preston R.R., Spiegel L.A., See L.H., Shah R., Matero A., O'Shaughnessy A., Rodriguez M., Shekher M., Swaby I., Schutz K., Parnell L.D., Dedhia N.N., McCombie W.R.
Submitted (MAR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
[11]Parnell L.D.
Submitted (APR-1999) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.

Cross-references

Sequence databases

AF104919 Genomic DNA. Translation: AAC72859.1.
AC007138 Genomic DNA. Translation: AAD22637.1.
AY065071 mRNA. Translation: AAL38247.1.
BT002558 mRNA. Translation: AAO00918.1.
AL161492 Genomic DNA. Translation: CAB77745.1.
BK005830 mRNA. Translation: DAA05812.1.
IPIIPI00536959.
PIRT02000.
RefSeqNP_192084.1.
UniGeneAt.3842

3D structure databases

ModBaseSearch...

Protein family/group databases

CAZyGT77. Glycosyltransferase Family 77.

Genome annotation databases

GeneID827905.
KEGGath:AT4G01750.

Organism-specific databases

TAIRAt4g01750.

Family and domain databases

InterProIPR003388. Reticulon.
[Graphical view]
PANTHERPTHR10994. Reticulon. 1 hit.
ProtoNetSearch...

Entry information

Entry nameQ9ZSJ0_ARATH
AccessionPrimary (citable) accession number: Q9ZSJ0
Entry history
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: April 14, 2009
This is version 42 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
Names and origin · Protein attributes · Ontologies · Sequences · References · Cross-references · Entry information