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Protein
Submitted name:

Retrotransposon Tto1 DNA

Gene
N/A
Organism
Nicotiana tabacum (Common tobacco)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Protein family/group databases

MEROPSiA11.002.

Names & Taxonomyi

Protein namesi
Submitted name:
Retrotransposon Tto1 DNAImported
OrganismiNicotiana tabacum (Common tobacco)Imported
Taxonomic identifieri4097 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Structurei

3D structure databases

ProteinModelPortaliQ9ZRJ0.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini468 – 639Integrase catalyticInterPro annotationAdd BLAST172

Family and domain databases

Gene3Di3.30.420.10. 1 hit.
4.10.60.10. 1 hit.
InterProiView protein in InterPro
IPR025724. GAG-pre-integrase_dom.
IPR001584. Integrase_cat-core.
IPR012337. RNaseH-like_sf.
IPR036397. RNaseH_sf.
IPR013103. RVT_2.
IPR036875. Znf_CCHC_sf.
PfamiView protein in Pfam
PF13976. gag_pre-integrs. 1 hit.
PF00665. rve. 1 hit.
PF07727. RVT_2. 1 hit.
SUPFAMiSSF53098. SSF53098. 1 hit.
SSF57756. SSF57756. 1 hit.
PROSITEiView protein in PROSITE
PS50994. INTEGRASE. 1 hit.

Sequencei

Sequence statusi: Complete.

Q9ZRJ0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEARTSKMVN LNGTNYHLWR NKMKDLLFVT KMHLPVFSSQ KPEDKSDEDW
60 70 80 90 100
EFEHNQVCGY IRQFVEDNVY NHISGVTHAR SLWDKLEELY ASKTGNNKLF
110 120 130 140 150
YLTKLMQVKY VEGTTVADHL NEIQGIVDQL SGMGIKFDDE VLALMVLATL
160 170 180 190 200
PESWETLKVS ITNSAPNGVV NMETVKSGIL NEEMRRRSQG TSSSQSEVLA
210 220 230 240 250
VTTRGRSQNK SQSNRDKSRG KSNKFANVEC HYCKKKGHIK RFCRQFQNDQ
260 270 280 290 300
KKNKGKKVKP EESSDDETNS FGEFNVVYDD DIINLTTQEM TWVIDSGATI
310 320 330 340 350
HATPRRELFS SYTLGDFGRV KMGNANFSTV VGKGDVCLET MNGMKLLLRD
360 370 380 390 400
VRHVPDMRLN LISVDKLDEE GYCNTFHNGQ WKLTKGSLMV ARGTKQSKLY
410 420 430 440 450
VTQASISQQV INVAENDSNI KLWHRRLGHM SEKSMARLVK KNALPGLNQI
460 470 480 490 500
QLKKCADCLA GKQNRVSFKR FPPSRRQNVL DLVHSDVCGP FKKSLGGARY
510 520 530 540 550
FVTFIDDHSR KTWVYTLKTK DQVFQVFKQF LTLVERETGK KLKCIRTDNG
560 570 580 590 600
GEYQGQFDAY CKEHGIRHQF TPPKTPQLNG LAERMNRTLI ERTRCLLSHS
610 620 630 640 650
KLPKAFWGEA LVTAAYVLNH SPCVPLQYKA PEKIWLGRDI SYDQLRVFGC
660 670 680 690 700
KAYVHVPKDE RSKLDVKTRE CVFIGYGQDM LGYKFYDPVE KKLVRSRDVV
710 720 730 740 750
FVEDQTIEDI DKVEKSTDDS AEFELPPTVV PRQVGDDVQD NQPEAPGLPN
760 770 780 790 800
EDELADTEGN EDNGDDDADE EDQPQPPILN NPPYHTRSGR VVQQSTRYSP
810 820 830 840 850
HEYVLLTDGG EPDSFEEAID DEHKEKWIEA MQDEIKSLHE NKTFELVKLP
860 870 880 890 900
KGKRALKNKW VFKMKHDEHN SLPRFKARLV VKGFNQRKGI DFDEIFSPVV
910 920 930 940 950
KMTSIRTVLG LAASLNLEVE QMDVKTAFLH GDLEEEIYME QPDGFQQKGK
960 970 980 990 1000
EDYVCRLRKS LYGLKQAPRQ WYKKFESVMG QHGYKKTTSD HCVFAQKFSD
1010 1020 1030 1040 1050
DDFIILLLYV DDMLIVGRNV SRINSLKEQL SKFFAMKDLG PAKQILGMRI
1060 1070 1080 1090 1100
MRDREAKKLW LSQEKYIEKV LQRFNMEKTK AVSCPLANHF RLSTKQSPST
1110 1120 1130 1140 1150
DDERRKMERI PYASAVGSLM YAMVCTRPDI AHAVGVVSRF LSNPGKEHWD
1160 1170 1180 1190 1200
AVKWILRYLR GTSKLCLCFG EDNPVLVGYT DADMAGDVDS RKSTSGYLIN
1210 1220 1230 1240 1250
FSGGAVSWQS KLQKCVALST TEAEFIAATE ACKELIWMKK FLTELGFSQD
1260 1270 1280 1290 1300
GYQLFCDSQS AIHLAKNASF HSRSKHIDVR YNWIRDVLEK KMLRLEKIHT
1310 1320 1330
DENGSDMLTK TLPKGKFEFC REAAGIVDPP YSWKGENC
Length:1,338
Mass (Da):153,175
Last modified:May 1, 1999 - v1
Checksum:i81233E3A718FA31E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
D83003 Genomic DNA. Translation: BAA11674.1.
PIRiT02206.

Similar proteinsi

Entry informationi

Entry nameiQ9ZRJ0_TOBAC
AccessioniPrimary (citable) accession number: Q9ZRJ0
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: October 25, 2017
This is version 67 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)