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Protein

Ferredoxin-3, chloroplastic

Gene

FD3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactori

[2Fe-2S] clusterBy similarityNote: Binds 1 [2Fe-2S] cluster.By similarity

Redox potential

E0 is -337 mV.1 Publication

Manual assertion based on experiment ini

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi98Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi103Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi106Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi136Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Electron transport, Transport

Keywords - Ligandi

2Fe-2S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin-3, chloroplastic
Short name:
AtFd3
Gene namesi
Name:FD3
Ordered Locus Names:At2g27510
ORF Names:F10A12.19
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

TAIRiAT2G27510.

Subcellular locationi

GO - Cellular componenti

  • chloroplast Source: UniProtKB-SubCell
  • plastid Source: TAIR
Complete GO annotation...

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 49ChloroplastSequence analysisCombined sourcesAdd BLAST49
ChainiPRO_000032257050 – 155Ferredoxin-3, chloroplasticAdd BLAST106

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei50N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9ZQG8.

Expressioni

Tissue specificityi

Expressed in roots and leaves.1 Publication

Inductioni

By nitrate.1 Publication

Gene expression databases

GenevisibleiQ9ZQG8. AT.

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G27510.1.

Structurei

3D structure databases

ProteinModelPortaliQ9ZQG8.
SMRiQ9ZQG8.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 1522Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST92

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.Curated
Contains 1 2Fe-2S ferredoxin-type domain.PROSITE-ProRule annotation

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
InParanoidiQ9ZQG8.
KOiK02639.
OMAiTCAGQIV.
OrthoDBiEOG09360QEN.
PhylomeDBiQ9ZQG8.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9ZQG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA
60 70 80 90 100
NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
110 120 130 140 150
GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK

ETELF
Length:155
Mass (Da):16,634
Last modified:May 1, 1999 - v1
Checksum:i07BA87E39B29F221
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006232 Genomic DNA. Translation: AAD15602.1.
CP002685 Genomic DNA. Translation: AEC08008.1.
AY086622 mRNA. Translation: AAM63681.1.
BT004187 mRNA. Translation: AAO42206.1.
BT005393 mRNA. Translation: AAO63813.1.
PIRiG84673.
RefSeqiNP_180320.1. NM_128311.3.
UniGeneiAt.38754.

Genome annotation databases

EnsemblPlantsiAT2G27510.1; AT2G27510.1; AT2G27510.
GeneIDi817297.
GrameneiAT2G27510.1; AT2G27510.1; AT2G27510.
KEGGiath:AT2G27510.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006232 Genomic DNA. Translation: AAD15602.1.
CP002685 Genomic DNA. Translation: AEC08008.1.
AY086622 mRNA. Translation: AAM63681.1.
BT004187 mRNA. Translation: AAO42206.1.
BT005393 mRNA. Translation: AAO63813.1.
PIRiG84673.
RefSeqiNP_180320.1. NM_128311.3.
UniGeneiAt.38754.

3D structure databases

ProteinModelPortaliQ9ZQG8.
SMRiQ9ZQG8.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi3702.AT2G27510.1.

Proteomic databases

PaxDbiQ9ZQG8.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT2G27510.1; AT2G27510.1; AT2G27510.
GeneIDi817297.
GrameneiAT2G27510.1; AT2G27510.1; AT2G27510.
KEGGiath:AT2G27510.

Organism-specific databases

TAIRiAT2G27510.

Phylogenomic databases

eggNOGiENOG410IYZG. Eukaryota.
COG0633. LUCA.
HOGENOMiHOG000217152.
InParanoidiQ9ZQG8.
KOiK02639.
OMAiTCAGQIV.
OrthoDBiEOG09360QEN.
PhylomeDBiQ9ZQG8.

Miscellaneous databases

PROiQ9ZQG8.

Gene expression databases

GenevisibleiQ9ZQG8. AT.

Family and domain databases

CDDicd00207. fer2. 1 hit.
Gene3Di3.10.20.30. 1 hit.
InterProiIPR001041. 2Fe-2S_ferredoxin-type.
IPR006058. 2Fe2S_fd_BS.
IPR012675. Beta-grasp_dom.
IPR010241. Fd_pln.
[Graphical view]
PfamiPF00111. Fer2. 1 hit.
[Graphical view]
SUPFAMiSSF54292. SSF54292. 1 hit.
TIGRFAMsiTIGR02008. fdx_plant. 1 hit.
PROSITEiPS00197. 2FE2S_FER_1. 1 hit.
PS51085. 2FE2S_FER_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiFER3_ARATH
AccessioniPrimary (citable) accession number: Q9ZQG8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: May 1, 1999
Last modified: November 30, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.