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Protein

Ferredoxin-3, chloroplastic

Gene

FD3

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.

Cofactori

[2Fe-2S] clusterBy similarityNote: Binds 1 [2Fe-2S] cluster.By similarity

Redox potential

E0 is -337 mV.1 Publication

Manual assertion based on experiment ini

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi98Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi103Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi106Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1
Metal bindingi136Iron-sulfur (2Fe-2S)PROSITE-ProRule annotation1

GO - Molecular functioni

Keywordsi

Biological processElectron transport, Transport
Ligand2Fe-2S, Iron, Iron-sulfur, Metal-binding

Names & Taxonomyi

Protein namesi
Recommended name:
Ferredoxin-3, chloroplastic
Short name:
AtFd3
Gene namesi
Name:FD3
Ordered Locus Names:At2g27510
ORF Names:F10A12.19
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G27510
TAIRilocus:2038593 AT2G27510

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Chloroplast Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertion Graphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

Chloroplast, Plastid

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Transit peptidei1 – 49ChloroplastSequence analysisCombined sourcesAdd BLAST49
ChainiPRO_000032257050 – 155Ferredoxin-3, chloroplasticAdd BLAST106

Amino acid modifications

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Modified residuei50N-acetylalanineCombined sources1

Keywords - PTMi

Acetylation

Proteomic databases

PaxDbiQ9ZQG8

PTM databases

iPTMnetiQ9ZQG8

Expressioni

Tissue specificityi

Expressed in roots and leaves.1 Publication

Inductioni

By nitrate.1 Publication

Gene expression databases

ExpressionAtlasiQ9ZQG8 baseline and differential
GenevisibleiQ9ZQG8 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G27510.1

Structurei

3D structure databases

ProteinModelPortaliQ9ZQG8
SMRiQ9ZQG8
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini61 – 1522Fe-2S ferredoxin-typePROSITE-ProRule annotationAdd BLAST92

Sequence similaritiesi

Belongs to the 2Fe2S plant-type ferredoxin family.Curated

Keywords - Domaini

Transit peptide

Phylogenomic databases

eggNOGiENOG410IYZG Eukaryota
COG0633 LUCA
HOGENOMiHOG000217152
InParanoidiQ9ZQG8
KOiK02639
OMAiSTCAGQL
OrthoDBiEOG09360QEN
PhylomeDBiQ9ZQG8

Family and domain databases

CDDicd00207 fer2, 1 hit
Gene3Di3.10.20.30, 1 hit
InterProiView protein in InterPro
IPR036010 2Fe-2S_ferredoxin-like_sf
IPR001041 2Fe-2S_ferredoxin-type
IPR006058 2Fe2S_fd_BS
IPR012675 Beta-grasp_dom_sf
IPR010241 Fd_pln
PfamiView protein in Pfam
PF00111 Fer2, 1 hit
SUPFAMiSSF54292 SSF54292, 1 hit
TIGRFAMsiTIGR02008 fdx_plant, 1 hit
PROSITEiView protein in PROSITE
PS00197 2FE2S_FER_1, 1 hit
PS51085 2FE2S_FER_2, 1 hit

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

Q9ZQG8-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATVRISSTS MTKAVLRSQT TNKLITNKSY NLSVGSTKRV SRSFGLKCSA
60 70 80 90 100
NSGGATMSAV YKVKLLGPDG QEDEFEVQDD QYILDAAEEA GVDLPYSCRA
110 120 130 140 150
GACSTCAGQI VSGNVDQSDG SFLEDSHLEK GYVLTCVAYP QSDCVIHTHK

ETELF
Length:155
Mass (Da):16,634
Last modified:May 1, 1999 - v1
Checksum:i07BA87E39B29F221
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006232 Genomic DNA Translation: AAD15602.1
CP002685 Genomic DNA Translation: AEC08008.1
AY086622 mRNA Translation: AAM63681.1
BT004187 mRNA Translation: AAO42206.1
BT005393 mRNA Translation: AAO63813.1
PIRiG84673
RefSeqiNP_180320.1, NM_128311.3
UniGeneiAt.38754

Genome annotation databases

EnsemblPlantsiAT2G27510.1; AT2G27510.1; AT2G27510
GeneIDi817297
GrameneiAT2G27510.1; AT2G27510.1; AT2G27510
KEGGiath:AT2G27510

Similar proteinsi

Entry informationi

Entry nameiFER3_ARATH
AccessioniPrimary (citable) accession number: Q9ZQG8
Entry historyiIntegrated into UniProtKB/Swiss-Prot: February 26, 2008
Last sequence update: May 1, 1999
Last modified: April 25, 2018
This is version 125 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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