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Protein

Pentatricopeptide repeat-containing protein At2g36730

Gene

PCMP-E44

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Recommended name:
Pentatricopeptide repeat-containing protein At2g36730
Gene namesi
Name:PCMP-E44
Ordered Locus Names:At2g36730
ORF Names:F13K3.13
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 2

Organism-specific databases

AraportiAT2G36730
TAIRilocus:2040565 AT2G36730

Subcellular locationi

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00003560471 – 501Pentatricopeptide repeat-containing protein At2g36730Add BLAST501

Proteomic databases

PaxDbiQ9ZQA1
PRIDEiQ9ZQA1

Expressioni

Gene expression databases

ExpressionAtlasiQ9ZQA1 baseline and differential
GenevisibleiQ9ZQA1 AT

Interactioni

Protein-protein interaction databases

STRINGi3702.AT2G36730.1

Structurei

3D structure databases

ProteinModelPortaliQ9ZQA1
SMRiQ9ZQA1
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati77 – 111PPR 1Add BLAST35
Repeati112 – 146PPR 2Add BLAST35
Repeati147 – 177PPR 3Add BLAST31
Repeati178 – 212PPR 4Add BLAST35
Repeati213 – 243PPR 5Add BLAST31
Repeati246 – 276PPR 6Add BLAST31
Repeati277 – 312PPR 7Add BLAST36
Repeati313 – 343PPR 8Add BLAST31
Repeati349 – 379PPR 9Add BLAST31

Region

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Regioni384 – 462Type E motifAdd BLAST79
Regioni463 – 493Type E(+) motifAdd BLAST31

Sequence similaritiesi

Belongs to the PPR family. PCMP-E subfamily.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiKOG4197 Eukaryota
ENOG410Z7Z7 LUCA
HOGENOMiHOG000237569
InParanoidiQ9ZQA1
OMAiIGSWDEA
OrthoDBiEOG09360AAM
PhylomeDBiQ9ZQA1

Family and domain databases

Gene3Di1.25.40.10, 3 hits
InterProiView protein in InterPro
IPR002885 Pentatricopeptide_repeat
IPR011990 TPR-like_helical_dom_sf
PfamiView protein in Pfam
PF01535 PPR, 2 hits
PF13041 PPR_2, 2 hits
TIGRFAMsiTIGR00756 PPR, 3 hits
PROSITEiView protein in PROSITE
PS51375 PPR, 8 hits

Sequencei

Sequence statusi: Complete.

Q9ZQA1-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIWSSDSCFK SRKHQCLIFL KLCSSIKHLL QIHGQIHLSS LQNDSFIISE
60 70 80 90 100
LVRVSSLSLA KDLAFARTLL LHSSDSTPST WNMLSRGYSS SDSPVESIWV
110 120 130 140 150
YSEMKRRGIK PNKLTFPFLL KACASFLGLT AGRQIQVEVL KHGFDFDVYV
160 170 180 190 200
GNNLIHLYGT CKKTSDARKV FDEMTERNVV SWNSIMTALV ENGKLNLVFE
210 220 230 240 250
CFCEMIGKRF CPDETTMVVL LSACGGNLSL GKLVHSQVMV RELELNCRLG
260 270 280 290 300
TALVDMYAKS GGLEYARLVF ERMVDKNVWT WSAMIVGLAQ YGFAEEALQL
310 320 330 340 350
FSKMMKESSV RPNYVTFLGV LCACSHTGLV DDGYKYFHEM EKIHKIKPMM
360 370 380 390 400
IHYGAMVDIL GRAGRLNEAY DFIKKMPFEP DAVVWRTLLS ACSIHHDEDD
410 420 430 440 450
EGIGEKVKKR LIELEPKRSG NLVIVANRFA EARMWAEAAE VRRVMKETKM
460 470 480 490 500
KKIAGESCLE LGGSFHRFFS GYDPRSEYVS IYELLDLFKF QLTCDYRLVS

E
Length:501
Mass (Da):56,951
Last modified:May 1, 1999 - v1
Checksum:iC0A52631698E1EB7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AC006282 Genomic DNA Translation: AAD20149.1
CP002685 Genomic DNA Translation: AEC09292.1
PIRiA84784
RefSeqiNP_181211.1, NM_129228.2
UniGeneiAt.66328

Genome annotation databases

EnsemblPlantsiAT2G36730.1; AT2G36730.1; AT2G36730
GeneIDi818245
GrameneiAT2G36730.1; AT2G36730.1; AT2G36730
KEGGiath:AT2G36730

Similar proteinsi

Entry informationi

Entry nameiPP188_ARATH
AccessioniPrimary (citable) accession number: Q9ZQA1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 16, 2008
Last sequence update: May 1, 1999
Last modified: April 25, 2018
This is version 89 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health