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Protein

Tubby-like F-box protein 1

Gene

TULP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • phosphatidylinositol binding Source: GO_Central
  • transcription factor activity, sequence-specific DNA binding Source: TAIR

GO - Biological processi

  • regulation of transcription, DNA-templated Source: TAIR
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Recommended name:
Tubby-like F-box protein 1
Short name:
AtTLP1
Gene namesi
Name:TULP1
Ordered Locus Names:At1g76900
ORF Names:F22K20.1, F7O12.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi
  • UP000006548 Componenti: Chromosome 1

Organism-specific databases

TAIRiAT1G76900.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 455455Tubby-like F-box protein 1PRO_0000272229Add
BLAST

Proteomic databases

PaxDbiQ9ZP59.
PRIDEiQ9ZP59.

PTM databases

iPTMnetiQ9ZP59.

Expressioni

Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

GenevisibleiQ9ZP59. AT.

Interactioni

Protein-protein interaction databases

BioGridi29244. 3 interactions.
IntActiQ9ZP59. 1 interaction.
STRINGi3702.AT1G76900.1.

Structurei

3D structure databases

ProteinModelPortaliQ9ZP59.
SMRiQ9ZP59. Positions 120-455.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini54 – 11259F-boxAdd
BLAST

Sequence similaritiesi

Belongs to the TUB family.Curated
Contains 1 F-box domain.Curated

Phylogenomic databases

eggNOGiKOG2502. Eukaryota.
ENOG410XQFT. LUCA.
HOGENOMiHOG000238161.
InParanoidiQ9ZP59.
OMAiQETPWAN.
OrthoDBiEOG09360CFC.
PhylomeDBiQ9ZP59.

Family and domain databases

Gene3Di3.20.90.10. 2 hits.
InterProiIPR001810. F-box_dom.
IPR000007. Tubby_C.
IPR025659. Tubby_C-like.
IPR018066. Tubby_C_CS.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF01167. Tub. 1 hit.
[Graphical view]
PRINTSiPR01573. SUPERTUBBY.
SUPFAMiSSF54518. SSF54518. 2 hits.
SSF81383. SSF81383. 1 hit.
PROSITEiPS01200. TUB_1. 1 hit.
PS01201. TUB_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZP59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV
60 70 80 90 100
TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
110 120 130 140 150
EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA
160 170 180 190 200
LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
210 220 230 240 250
KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE
260 270 280 290 300
LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
310 320 330 340 350
TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK
360 370 380 390 400
NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
410 420 430 440 450
TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT

KLACE
Length:455
Mass (Da):51,195
Last modified:May 1, 1999 - v1
Checksum:i53072DE655960C3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF487267 mRNA. Translation: AAQ06240.1.
AC002291 Genomic DNA. Translation: AAC00626.1.
AC079283 Genomic DNA. Translation: AAG51146.1.
CP002684 Genomic DNA. Translation: AEE35900.1.
CP002684 Genomic DNA. Translation: AEE35901.1.
AY139758 mRNA. Translation: AAM98079.1.
BT003039 mRNA. Translation: AAO23604.1.
PIRiH96797.
RefSeqiNP_177816.1. NM_106341.2.
NP_849894.1. NM_179563.2.
UniGeneiAt.17482.

Genome annotation databases

EnsemblPlantsiAT1G76900.1; AT1G76900.1; AT1G76900.
AT1G76900.2; AT1G76900.2; AT1G76900.
GeneIDi844025.
GrameneiAT1G76900.1; AT1G76900.1; AT1G76900.
AT1G76900.2; AT1G76900.2; AT1G76900.
KEGGiath:AT1G76900.

Cross-referencesi

Web resourcesi

PlantsUBQ

A functional genomics database for the ubiquitin/26S proteasome proteolytic pathway in plants

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF487267 mRNA. Translation: AAQ06240.1.
AC002291 Genomic DNA. Translation: AAC00626.1.
AC079283 Genomic DNA. Translation: AAG51146.1.
CP002684 Genomic DNA. Translation: AEE35900.1.
CP002684 Genomic DNA. Translation: AEE35901.1.
AY139758 mRNA. Translation: AAM98079.1.
BT003039 mRNA. Translation: AAO23604.1.
PIRiH96797.
RefSeqiNP_177816.1. NM_106341.2.
NP_849894.1. NM_179563.2.
UniGeneiAt.17482.

3D structure databases

ProteinModelPortaliQ9ZP59.
SMRiQ9ZP59. Positions 120-455.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi29244. 3 interactions.
IntActiQ9ZP59. 1 interaction.
STRINGi3702.AT1G76900.1.

PTM databases

iPTMnetiQ9ZP59.

Proteomic databases

PaxDbiQ9ZP59.
PRIDEiQ9ZP59.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblPlantsiAT1G76900.1; AT1G76900.1; AT1G76900.
AT1G76900.2; AT1G76900.2; AT1G76900.
GeneIDi844025.
GrameneiAT1G76900.1; AT1G76900.1; AT1G76900.
AT1G76900.2; AT1G76900.2; AT1G76900.
KEGGiath:AT1G76900.

Organism-specific databases

TAIRiAT1G76900.

Phylogenomic databases

eggNOGiKOG2502. Eukaryota.
ENOG410XQFT. LUCA.
HOGENOMiHOG000238161.
InParanoidiQ9ZP59.
OMAiQETPWAN.
OrthoDBiEOG09360CFC.
PhylomeDBiQ9ZP59.

Miscellaneous databases

PROiQ9ZP59.

Gene expression databases

GenevisibleiQ9ZP59. AT.

Family and domain databases

Gene3Di3.20.90.10. 2 hits.
InterProiIPR001810. F-box_dom.
IPR000007. Tubby_C.
IPR025659. Tubby_C-like.
IPR018066. Tubby_C_CS.
[Graphical view]
PfamiPF00646. F-box. 1 hit.
PF01167. Tub. 1 hit.
[Graphical view]
PRINTSiPR01573. SUPERTUBBY.
SUPFAMiSSF54518. SSF54518. 2 hits.
SSF81383. SSF81383. 1 hit.
PROSITEiPS01200. TUB_1. 1 hit.
PS01201. TUB_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTLP1_ARATH
AccessioniPrimary (citable) accession number: Q9ZP59
Entry historyi
Integrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 1, 1999
Last modified: September 7, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.