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Protein

Tubby-like F-box protein 1

Gene

TULP1

Organism
Arabidopsis thaliana (Mouse-ear cress)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

  • DNA binding transcription factor activity Source: TAIR
  • phosphatidylinositol binding Source: GO_Central

GO - Biological processi

  • regulation of transcription, DNA-templated Source: TAIR

Names & Taxonomyi

Protein namesi
Recommended name:
Tubby-like F-box protein 1
Short name:
AtTLP1
Gene namesi
Name:TULP1
Ordered Locus Names:At1g76900
ORF Names:F22K20.1, F7O12.7
OrganismiArabidopsis thaliana (Mouse-ear cress)
Taxonomic identifieri3702 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsmalvidsBrassicalesBrassicaceaeCamelineaeArabidopsis
Proteomesi

Organism-specific databases

AraportiAT1G76900
TAIRilocus:2025327 AT1G76900

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002722291 – 455Tubby-like F-box protein 1Add BLAST455

Proteomic databases

PaxDbiQ9ZP59
PRIDEiQ9ZP59

PTM databases

iPTMnetiQ9ZP59

Expressioni

Tissue specificityi

Ubiquitous.1 Publication

Gene expression databases

ExpressionAtlasiQ9ZP59 baseline and differential
GenevisibleiQ9ZP59 AT

Interactioni

Protein-protein interaction databases

BioGridi29244, 3 interactors
IntActiQ9ZP59, 2 interactors
STRINGi3702.AT1G76900.1

Structurei

3D structure databases

ProteinModelPortaliQ9ZP59
SMRiQ9ZP59
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini54 – 112F-boxAdd BLAST59

Sequence similaritiesi

Belongs to the TUB family.Curated

Phylogenomic databases

eggNOGiKOG2502 Eukaryota
ENOG410XQFT LUCA
HOGENOMiHOG000238161
InParanoidiQ9ZP59
OMAiESESVWP
OrthoDBiEOG09360CFC
PhylomeDBiQ9ZP59

Family and domain databases

InterProiView protein in InterPro
IPR036047 F-box-like_dom_sf
IPR001810 F-box_dom
IPR025659 Tubby-like_C
IPR000007 Tubby_C
IPR018066 Tubby_C_CS
PfamiView protein in Pfam
PF00646 F-box, 1 hit
PF01167 Tub, 1 hit
PRINTSiPR01573 SUPERTUBBY
SUPFAMiSSF54518 SSF54518, 2 hits
SSF81383 SSF81383, 1 hit
PROSITEiView protein in PROSITE
PS01200 TUB_1, 1 hit
PS01201 TUB_2, 1 hit

Sequencei

Sequence statusi: Complete.

Q9ZP59-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSFRSIVRDV RDSIGSLSRR SFDFKLSSLN KEGGKSRGSV QDSHEEQLVV
60 70 80 90 100
TIQETPWANL PPELLRDVIK RLEESESVWP ARRHVVACAS VCRSWRDMCK
110 120 130 140 150
EIVQSPELSG KITFPVSLKQ PGPRDATMQC FIKRDKSNLT YHLYLCLSPA
160 170 180 190 200
LLVENGKFLL SAKRIRRTTY TEYVISMHAD TISRSSNTYI GKIRSNFLGT
210 220 230 240 250
KFIIYDTQPA YNSNIARAVQ PVGLSRRFYS KRVSPKVPSG SYKIAQVSYE
260 270 280 290 300
LNVLGTRGPR RMHCAMNSIP ASSLAEGGTV PGQPDIIVPR SILDESFRSI
310 320 330 340 350
TSSSSRKITY DYSNDFSSAR FSDILGPLSE DQEVVLEEGK ERNSPPLVLK
360 370 380 390 400
NKPPRWHEQL QCWCLNFRGR VTVASVKNFQ LIAANQPQPQ PQPQPQPQPL
410 420 430 440 450
TQPQPSGQTD GPDKIILQFG KVGKDMFTMD FRYPLSAFQA FAICLSSFDT

KLACE
Length:455
Mass (Da):51,195
Last modified:May 1, 1999 - v1
Checksum:i53072DE655960C3E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF487267 mRNA Translation: AAQ06240.1
AC002291 Genomic DNA Translation: AAC00626.1
AC079283 Genomic DNA Translation: AAG51146.1
CP002684 Genomic DNA Translation: AEE35900.1
CP002684 Genomic DNA Translation: AEE35901.1
CP002684 Genomic DNA Translation: ANM61194.1
AY139758 mRNA Translation: AAM98079.1
BT003039 mRNA Translation: AAO23604.1
PIRiH96797
RefSeqiNP_001319391.1, NM_001334747.1
NP_177816.1, NM_106341.2
NP_849894.1, NM_179563.3
UniGeneiAt.17482

Genome annotation databases

EnsemblPlantsiAT1G76900.1; AT1G76900.1; AT1G76900
AT1G76900.2; AT1G76900.2; AT1G76900
AT1G76900.3; AT1G76900.3; AT1G76900
GeneIDi844025
GrameneiAT1G76900.1; AT1G76900.1; AT1G76900
AT1G76900.2; AT1G76900.2; AT1G76900
AT1G76900.3; AT1G76900.3; AT1G76900
KEGGiath:AT1G76900

Entry informationi

Entry nameiTLP1_ARATH
AccessioniPrimary (citable) accession number: Q9ZP59
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 23, 2007
Last sequence update: May 1, 1999
Last modified: April 25, 2018
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programPlant Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Arabidopsis thaliana
    Arabidopsis thaliana: entries and gene names
  2. SIMILARITY comments
    Index of protein domains and families

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