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Protein
Submitted name:

Alpha-expansin

Gene

Nt-EXPA3

Organism
Nicotiana tabacum (Common tobacco)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-expansinImported
Gene namesi
Name:Nt-EXPA3Imported
OrganismiNicotiana tabacum (Common tobacco)Imported
Taxonomic identifieri4097 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Subcellular locationi

  • Membrane SAAS annotation; Peripheral membrane protein SAAS annotation
  • Secretedcell wall SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneSAAS annotation, SecretedSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliQ9ZP37.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini48 – 163Expansin-like EG45InterPro annotationAdd BLAST116
Domaini173 – 252Expansin-like CBDInterPro annotationAdd BLAST80

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
2.60.40.760. 1 hit.
InterProiIPR007118. Expan_Lol_pI.
IPR002963. Expansin.
IPR007112. Expansin/allergen_DPBB_dom.
IPR007117. Expansin_CBD.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
PF01357. Pollen_allerg_1. 1 hit.
[Graphical view]
PRINTSiPR01226. EXPANSIN.
PR01225. EXPANSNFAMLY.
SMARTiSM00837. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF49590. SSF49590. 1 hit.
SSF50685. SSF50685. 1 hit.
PROSITEiPS50843. EXPANSIN_CBD. 1 hit.
PS50842. EXPANSIN_EG45. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZP37-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAKCGILALG FIIGFFSIFF NANAFTASGW MRAHATFYGG ADASGTMGGA
60 70 80 90 100
CGYGNLYSTG YGTRSAALST ALFNSGGSCG QCYKIICDFY AEPRWCKKGV
110 120 130 140 150
SVTITATNFC PPNYALPSDN GGWCNPPRQH FDMAQPAWEK IGVYRGGIIP
160 170 180 190 200
VFYQRVPCKK RGGVRFTING RDYFELVLVS NVGGAGSVRS VQIKGSRTNW
210 220 230 240 250
MTMSNNWGAN FQSNTYLNGQ SLSFRVTTTD GVTKTFLNIV PANWRFGQTF

SSPTQFS
Length:257
Mass (Da):27,917
Last modified:May 1, 1999 - v1
Checksum:i1E09E28B148B3D56
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049352 mRNA. Translation: AAC96079.1.
RefSeqiNP_001312358.1. NM_001325429.1.
UniGeneiNta.4018.

Genome annotation databases

GeneIDi107787137.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049352 mRNA. Translation: AAC96079.1.
RefSeqiNP_001312358.1. NM_001325429.1.
UniGeneiNta.4018.

3D structure databases

ProteinModelPortaliQ9ZP37.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi107787137.

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
2.60.40.760. 1 hit.
InterProiIPR007118. Expan_Lol_pI.
IPR002963. Expansin.
IPR007112. Expansin/allergen_DPBB_dom.
IPR007117. Expansin_CBD.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
PF01357. Pollen_allerg_1. 1 hit.
[Graphical view]
PRINTSiPR01226. EXPANSIN.
PR01225. EXPANSNFAMLY.
SMARTiSM00837. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF49590. SSF49590. 1 hit.
SSF50685. SSF50685. 1 hit.
PROSITEiPS50843. EXPANSIN_CBD. 1 hit.
PS50842. EXPANSIN_EG45. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiQ9ZP37_TOBAC
AccessioniPrimary (citable) accession number: Q9ZP37
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: November 30, 2016
This is version 89 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.