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Protein
Submitted name:

Alpha-expansin

Gene

Nt-EXPA4

Organism
Nicotiana tabacum (Common tobacco)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Alpha-expansinImported
Gene namesi
Name:Nt-EXPA4Imported
OrganismiNicotiana tabacum (Common tobacco)Imported
Taxonomic identifieri4097 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaeasteridslamiidsSolanalesSolanaceaeNicotianoideaeNicotianeaeNicotiana

Subcellular locationi

  • Membrane SAAS annotation; Peripheral membrane protein SAAS annotation
  • Secretedcell wall SAAS annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

MembraneSAAS annotation, SecretedSAAS annotation

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 249229Sequence analysisPRO_5004337738Add
BLAST

Structurei

3D structure databases

ProteinModelPortaliQ9ZP36.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini44 – 156113Expansin-like EG45InterPro annotationAdd
BLAST
Domaini166 – 24580Expansin-like CBDInterPro annotationAdd
BLAST

Sequence similaritiesi

Contains expansin-like CBD domain.SAAS annotation
Contains expansin-like EG45 domain.SAAS annotation

Keywords - Domaini

SignalSequence analysis

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
2.60.40.760. 1 hit.
InterProiIPR007118. Expan_Lol_pI.
IPR002963. Expansin.
IPR007112. Expansin/allergen_DPBB_dom.
IPR007117. Expansin_CBD.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
PF01357. Pollen_allerg_1. 1 hit.
[Graphical view]
PRINTSiPR01226. EXPANSIN.
PR01225. EXPANSNFAMLY.
SMARTiSM00837. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF49590. SSF49590. 1 hit.
SSF50685. SSF50685. 1 hit.
PROSITEiPS50843. EXPANSIN_CBD. 1 hit.
PS50842. EXPANSIN_EG45. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Q9ZP36-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAYFGICFVG LLAMVSSVYG YGGGGWINAH ATFYGGGDAS GTMGGACGYG
60 70 80 90 100
NLYSQGYGTN TAALSTAMFN NGLSCGSCFE IRCVNDRKGC LPGSIVVTAT
110 120 130 140 150
NFCPPNNALP NNAGGWCNPP LHHFDLSQPI FQHIAQYKAG IVPVAYRRVP
160 170 180 190 200
CRRRGGIRFT INGHAYFNLV LVTNVGGGGD VHAVAVKGSR TGWQPMSRNW
210 220 230 240
GQNWQNNNYL NGQTLSFKVT TGDGRSLISY NVAPAHWSFG HTYTGAQFH
Length:249
Mass (Da):26,597
Last modified:May 1, 1999 - v1
Checksum:i98F1D583B5E846CA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049353 mRNA. Translation: AAC96080.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AF049353 mRNA. Translation: AAC96080.1.

3D structure databases

ProteinModelPortaliQ9ZP36.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Family and domain databases

Gene3Di2.40.40.10. 1 hit.
2.60.40.760. 1 hit.
InterProiIPR007118. Expan_Lol_pI.
IPR002963. Expansin.
IPR007112. Expansin/allergen_DPBB_dom.
IPR007117. Expansin_CBD.
IPR009009. RlpA-like_DPBB.
[Graphical view]
PfamiPF03330. DPBB_1. 1 hit.
PF01357. Pollen_allerg_1. 1 hit.
[Graphical view]
PRINTSiPR01226. EXPANSIN.
PR01225. EXPANSNFAMLY.
SMARTiSM00837. DPBB_1. 1 hit.
[Graphical view]
SUPFAMiSSF49590. SSF49590. 1 hit.
SSF50685. SSF50685. 1 hit.
PROSITEiPS50843. EXPANSIN_CBD. 1 hit.
PS50842. EXPANSIN_EG45. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Acid-growth response and alpha-expansins in suspension cultures of bright yellow 2 tobacco."
    Link B.M., Cosgrove D.J.
    Plant Physiol. 118:907-916(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.

Entry informationi

Entry nameiQ9ZP36_TOBAC
AccessioniPrimary (citable) accession number: Q9ZP36
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1999
Last sequence update: May 1, 1999
Last modified: July 6, 2016
This is version 86 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.