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Reviewed, UniProtKB/Swiss-Prot Q9ZM69 (COPA_HELPJ)

Last modified November 4, 2008. Version 66. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (1) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents

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Names and origin

Protein namesRecommended name:
    Copper-transporting ATPase
    EC=3.6.3.4
Gene names
Name: copA
Ordered Locus Names: jhp_0353
OrganismHelicobacter pylori J99 (Campylobacter pylori J99) [Complete proteome] [HAMAP]
Taxonomic identifier85963 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

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Protein attributes

Sequence length745 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceInferred from homology.

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General annotation (Comments)

Function

Probably involved in copper export.

Catalytic activity

ATP + H(2)O + Cu(2+)(In) = ADP + phosphate + Cu(2+)(Out).

Subcellular location

Cell membrane; Multi-pass membrane protein.

Sequence similarities

Belongs to the cation transport ATPase (P-type) family. Type IB subfamily.

Contains 1 HMA domain.

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Ontologies

Keywords

   Biological processCopper transport
Ion transport
Transport
   Cellular componentCell membrane
Membrane
   DomainTransmembrane
   LigandATP-binding
Copper
Magnesium
Metal-binding
Nucleotide-binding
   Molecular functionHydrolase
   PTMPhosphoprotein
   Technical termComplete proteome

Gene Ontology (GO)

   Cellular componentplasma membrane

Inferred from electronic annotation. Source: UniProtKB-KW

   Molecular functioncopper ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

magnesium ion binding

Inferred from electronic annotation. Source: UniProtKB-KW

Complete GO annotation...

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Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 745745Copper-transporting ATPase
PRO_0000046174

Regions

Topological domain1 – 8383Cytoplasmic Potential
Transmembrane84 – 10421 Potential
Topological domain105 – 12420Extracellular Potential
Transmembrane125 – 14420 Potential
Topological domain145 – 1517Cytoplasmic Potential
Transmembrane152 – 17221 Potential
Topological domain173 – 19422Extracellular Potential
Transmembrane195 – 21521 Potential
Topological domain216 – 343128Cytoplasmic Potential
Transmembrane344 – 36623 Potential
Topological domain367 – 37913Extracellular Potential
Transmembrane380 – 39718 Potential
Topological domain398 – 685288Cytoplasmic Potential
Transmembrane686 – 70520 Potential
Topological domain706 – 71611Extracellular Potential
Transmembrane717 – 73519 Potential
Topological domain736 – 74510Cytoplasmic Potential
Domain2 – 6867HMA

Sites

Active site43514-aspartylphosphate intermediate By similarity
Metal binding121Copper Potential
Metal binding151Copper Potential
Metal binding6311Magnesium By similarity
Metal binding6351Magnesium By similarity

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Sequences

Sequence LengthMass (Da)Tools
Q9ZM69-1 [UniParc].

Last modified May 1, 1999. Version 1.
Checksum: 69E5CD155579C59F

FASTA74581,912
        10         20         30         40         50         60 
MKESFYIEGM TCTACSSGIE RSLGRKSFVK KIEVSLLNKS ANIEFNENET NLDEIFKLIE 

        70         80         90        100        110        120 
KLGYSPKKTL AEEKKEFFSP NVKLALAVIF TLFVVYLSMG AMLSPSLLPE SLLTINHHSN 

       130        140        150        160        170        180 
FLNACLQLIG ALIVMHLGRD FYIQGFKALW HRQPNMSSLI AIGTSAALIS SLWQLYLVYT 

       190        200        210        220        230        240 
NHYTDQWSYG HYYFESVCVI LMFVMVGKRI ENVSKDKALD AMQALMKNAP KTALKMHNNQ 

       250        260        270        280        290        300 
QIEVLVDSIV VGDILKVLPG SAIAVDGEII EGEGELDESM LSGEALPVYK KVGDKVFSGT 

       310        320        330        340        350        360 
LNSNTSFLMK ATQDNKNSTL SQIIEMIHNA QSSKAEISRL ADKVSSVFVP SVIAIAVLAF 

       370        380        390        400        410        420 
VVWLIIAPKP DFWWNFRTAL EVFVSVLVIS CPCALGLATP MSILVANQKA SSLGLFFKDA 

       430        440        450        460        470        480 
KSLEKARLVN TIVFDKTGTL TNGKPVVKSI HSNIELLELL SLASSIEKSS EHVIAKGIVE 

       490        500        510        520        530        540 
YAKERNAPLK DISEVKVKTG FGISAKVDYQ GAKEIIKVGN SEFFNPINTL EIKENGILVF 

       550        560        570        580        590        600 
VGRAINEKED ELLGAFVLED LPKKGVKEHI AQIKNLGINT FLLSGDNREN VKKCALELGI 

       610        620        630        640        650        660 
DGYISNAKPQ DKLNKIKELK EKGRIVMMVG DGLNDAPSLA MSDVAVVMAK GSDVSVQAAD 

       670        680        690        700        710        720 
IVSFNNDIKS VYSAIKLSQA TIKNIKENLF WAFCYNSVFI PLACGVLYKA NIMLSPAIAG 

       730        740 
LAMSLSSVSV VLNSQRLRNF KIKDH

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References

[1]"Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori."
Alm R.A., Ling L.-S.L., Moir D.T., King B.L., Brown E.D., Doig P.C., Smith D.R., Noonan B., Guild B.C., deJonge B.L., Carmel G., Tummino P.J., Caruso A., Uria-Nickelsen M., Mills D.M., Ives C., Gibson R., Merberg D. expand/collapse author list , Mills S.D., Jiang Q., Taylor D.E., Vovis G.F., Trust T.J.
Nature 397:176-180(1999) [PubMed: 9923682] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

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Cross-references

Sequence databases

AE001439 Genomic DNA. Translation: AAD05935.1.
PIRA71941.
RefSeqNP_223072.1.

3D structure databases

HSSPHSSP built from PDB template 1CPZ based on UniProtKB Q47840.
ModBaseSearch...

Genome annotation databases

GeneID889106.
GenomeReviewsGene locus jhp_0353 in contig AE001439_GR.
KEGGhpj:jhp0353.
NMPDRfig|85963.1.peg.350.

Organism-specific databases

CMRSearch...

Phylogenomic databases

HOGENOMQ9ZM69.

Enzyme and pathway databases

BioCycHPYL85963:JHP0353-MON.

Family and domain databases

InterProIPR006416. ATPase-IB_hvy.
IPR001757. ATPase_P.
IPR006403. ATPase_P_cat/Cu.
IPR001756. ATPase_P_Cu.
IPR005834. Dehalogen-like_hydro.
IPR008250. E1-E2_ATPase_reg.
IPR006121. HeavyMe_transpt.
[Graphical view]
PANTHERPTHR11939. ATPase_P. 1 hit.
PfamPF00122. E1-E2_ATPase. 1 hit.
PF00403. HMA. 1 hit.
PF00702. Hydrolase. 1 hit.
[Graphical view]
PRINTSPR00119. CATATPASE.
PR00943. CUATPASE.
TIGRFAMsTIGR01511. ATPase-IB1_Cu. 1 hit.
TIGR01525. ATPase-IB_hvy. 1 hit.
TIGR01494. ATPase_P-type. 2 hits.
PROSITEPS00154. ATPASE_E1_E2. 1 hit.
PS01047. HMA_1. 1 hit.
PS50846. HMA_2. 1 hit.
[Graphical view]
BLOCKSSearch...
ProtoNetSearch...

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Entry information

Entry nameCOPA_HELPJ
AccessionPrimary (citable) accession number: Q9ZM69
Entry history
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: May 1, 1999
Last modified: November 4, 2008
This is version 66 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHAMAP (High-quality Automated and Manual Annotation of microbial Proteomes)

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Relevant documents

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Cross-references · Entry information · Relevant documents