Q9ZKF2 (Y395_HELPJ) Reviewed, UniProtKB/Swiss-Prot

Names and origin

Protein names

Recommended name:
UPF0001 protein jhp_0986

Gene names

Ordered Locus Names:

jhp_0986

Organism

Helicobacter pylori (strain J99) (Campylobacter pylori J99) [Complete proteome] [HAMAP]

Taxonomic identifier

85963 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Epsilonproteobacteria › Campylobacterales › Helicobacteraceae › Helicobacter

Protein attributes

Sequence length	222 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity.
Sequence similarities	Belongs to the UPF0001 family.

Ontologies

Keywords
Ligand	Pyridoxal phosphate
Technical term	Complete proteome
Gene Ontology (GO)
None. [Check GOA]

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Chain	1 – 222	222	UPF0001 protein jhp_0986		PRO_0000163201
Amino acid modifications
	Modified residue	35	1	N6-(pyridoxal phosphate)lysine By similarity

Sequences

	Sequence		Length	Mass (Da)
	Q9ZKF2 [UniParc]. Last modified May 1, 1999. Version 1. Checksum: 79A7FB4DEC3F4721	FASTA	222	25,060
	10 20 30 40 50 60 MLDYRQRIDT LITKIEKARI AYSRHHIVKI VAVSKNASPE AIQHYYNCSQ RAFGENKVQD 70 80 90 100 110 120 LKIKMHSLEH LPLEWHMIGS LQENKINALL SLKPALLHSL DSLKLALKIE KRCEILGVNL 130 140 150 160 170 180 NALLQVNSAY EESKSGVVPE EALETYSQIS ETCKRLKLKG LMCIGAHTDD ETKIEKSFTT 190 200 210 220 TKKLFDQIKN ASVLSMGMSD DFELAIACGA NLLRIGSFLF KE

References

[1]

"Genomic sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori." Alm R.A., Ling L.-S.L., Moir D.T., King B.L., Brown E.D., Doig P.C., Smith D.R., Noonan B., Guild B.C., deJonge B.L., Carmel G., Tummino P.J., Caruso A., Uria-Nickelsen M., Mills D.M., Ives C., Gibson R., Merberg D. , Mills S.D., Jiang Q., Taylor D.E., Vovis G.F., Trust T.J. Nature 397:176-180(1999) [PubMed: 9923682] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: J99.

+

Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AE001439 Genomic DNA. Translation: AAD06567.1.
PIR	E71864.
RefSeq	NP_223703.1. NC_000921.1.
3D structure databases
ProteinModelPortal	Q9ZKF2.
ModBase	Search...
Protein-protein interaction databases
STRING	Q9ZKF2.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	889625.
GenomeReviews	Gene locus jhp_0986 in contig AE001439_GR.
KEGG	hpj:jhp0986.
NMPDR	fig|85963.1.peg.981.
PATRIC	20606762. VBIHelPyl98156_1074.
Organism-specific databases
CMR	Search...
Phylogenomic databases
eggNOG	COG0325.
HOGENOM	HBG289671.
OMA	AVSKTFE.
PhylomeDB	Q9ZKF2.
ProtClustDB	CLSK2459854.
Enzyme and pathway databases
BioCyc	HPYL85963:JHP0986-MONOMER.
Family and domain databases
InterPro	IPR001608. Ala_racemase_N. IPR011078. UPF0001. [Graphical view]
KO	K06997.
PANTHER	PTHR10146. PP_YBL036C. 1 hit.
Pfam	PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PIRSF	PIRSF004848. YBL036c_PLPDEIII. 1 hit.
TIGRFAMs	TIGR00044. TIGR00044. 1 hit.
PROSITE	PS01211. UPF0001. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

Y395_HELPJ

Accession

Primary (citable) accession number: Q9ZKF2

Entry history

Integrated into UniProtKB/Swiss-Prot:	December 1, 2000
Last sequence update:	May 1, 1999
Last modified:	January 25, 2012
This is version 62 of the entry and version 1 of the sequence. [Complete history]

Entry status

Reviewed (UniProtKB/Swiss-Prot)

Annotation program

Prokaryotic Protein Annotation Program